BLASTX nr result

ID: Scutellaria24_contig00030957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030957
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   119   3e-25
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   111   5e-23
emb|CBI32804.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   106   2e-21
ref|XP_003559895.1| PREDICTED: putative SWI/SNF-related matrix-a...   102   3e-20

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/105 (56%), Positives = 75/105 (71%)
 Frame = -3

Query: 431  PDGPTIMLANLKACNARIDLTAASTVYLLEPWWNPALEDQAMDRVHRIGQKETLKVVRLL 252
            P+GPT++LA+LKA  A I+LTAAS VYLLEPWWNPA+E+QAMDRVHRIGQKE +K+VRL+
Sbjct: 769  PNGPTVLLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLI 828

Query: 251  ARNTXXXXXXXXXXXKRMVAKNAFGGRNQNTRSRLGSRDFASLIN 117
            ARN+           K+ +AK AFG R    R  +G  D   L++
Sbjct: 829  ARNSIEERILELQERKKKLAKEAFGRRGLKDRREVGVEDLRMLMS 873


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -3

Query: 431  PDGPTIMLANLKACNARIDLTAASTVYLLEPWWNPALEDQAMDRVHRIGQKETLKVVRLL 252
            PDGPT++LA+LKA  A I+L  AS VYLLEPWWNPA+E+QAMDRVHRIGQ+E + VVRL+
Sbjct: 694  PDGPTVLLASLKASGAGINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLI 753

Query: 251  ARNTXXXXXXXXXXXKRMVAKNAFGGRNQNTRSRLGSRDFASLIN 117
            A+++           K+ +AK AFG R   T+  +G  D  +L++
Sbjct: 754  AQSSIEERILEMQERKKKLAKEAFGRRGTKTQREVGIDDLRALMS 798


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/100 (55%), Positives = 70/100 (70%)
 Frame = -3

Query: 416  IMLANLKACNARIDLTAASTVYLLEPWWNPALEDQAMDRVHRIGQKETLKVVRLLARNTX 237
            ++LA+LKA  A I+LTAAS VYLLEPWWNPA+E+QAMDRVHRIGQKE +K+VRL+ARN+ 
Sbjct: 713  VLLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSI 772

Query: 236  XXXXXXXXXXKRMVAKNAFGGRNQNTRSRLGSRDFASLIN 117
                      K+ +AK AFG R    R  +G  D   L++
Sbjct: 773  EERILELQERKKKLAKEAFGRRGLKDRREVGVEDLRMLMS 812


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/87 (60%), Positives = 65/87 (74%)
 Frame = -3

Query: 431 PDGPTIMLANLKACNARIDLTAASTVYLLEPWWNPALEDQAMDRVHRIGQKETLKVVRLL 252
           P+GPT++LA+LKA  A I+L AAS VYLLEPWWNPA+E+QAMDRVHRIGQKE + VVRL+
Sbjct: 259 PNGPTVLLASLKASCAGINLAAASKVYLLEPWWNPAVEEQAMDRVHRIGQKEDVTVVRLI 318

Query: 251 ARNTXXXXXXXXXXXKRMVAKNAFGGR 171
            RN+           K+ +AK AFG R
Sbjct: 319 TRNSIEERILEMQERKKKLAKEAFGRR 345


>ref|XP_003559895.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Brachypodium distachyon]
          Length = 828

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
 Frame = -3

Query: 431  PDGPTIMLANLKACNARIDLTAASTVYLLEPWWNPALEDQAMDRVHRIGQKETLKVVRLL 252
            PD PT++LA+LKA  A I+LTAASTVYL +PWWNP +E+QAMDRVHRIGQK+ +KVVRLL
Sbjct: 715  PDTPTVLLASLKAAGAGINLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQKKAVKVVRLL 774

Query: 251  ARNTXXXXXXXXXXXKRMVAKNAF---GGRNQNTRSRL 147
             + +           K+ +   AF   GG  +N   RL
Sbjct: 775  VKGSIEERILELQERKKRLISGAFGRKGGAKENKEMRL 812


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