BLASTX nr result

ID: Scutellaria24_contig00030948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030948
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts...   131   6e-29
ref|XP_003595517.1| Pentatricopeptide repeat-containing protein ...   130   1e-28
gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-framesh...   130   1e-28
ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts...   128   5e-28
ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28

>ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts 2-like [Glycine max]
          Length = 1188

 Score =  131 bits (329), Expect = 6e-29
 Identities = 70/134 (52%), Positives = 88/134 (65%)
 Frame = +1

Query: 1   SKTQDQSTDMALESDKNQIATQENSEVPADAAIVPXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +K QDQ+T++  ESDK Q  T E+ EV  +++ +P                         
Sbjct: 384 AKNQDQTTEILPESDKGQQTTHESGEVSTESSALPEAESTERVKDKEEKDKSKELDREKE 443

Query: 181 XXXXXTERRGESEKDKTKGLDGTNLEALLHRLPSCVSRDLIDQLTVEFCYLNSKSTRKKL 360
                 +++GE+EKDK + ++GTNL+ALL RLP CVSRDLIDQLTVEFCYLNSKS+RKKL
Sbjct: 444 KEKE-NDKKGENEKDKLRSVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSSRKKL 502

Query: 361 VRALFNVPRTSLEL 402
           VRALFNVPRTSLEL
Sbjct: 503 VRALFNVPRTSLEL 516


>ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484565|gb|AES65768.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1705

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/134 (52%), Positives = 88/134 (65%), Gaps = 1/134 (0%)
 Frame = +1

Query: 4   KTQDQSTDMALESDKNQIATQENSEVPADAAIVPXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           K QDQST++  ESDK+Q+ T ++ EV  +++++P                          
Sbjct: 391 KGQDQSTEILPESDKSQLVTLDSGEVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEK 450

Query: 184 XXXXT-ERRGESEKDKTKGLDGTNLEALLHRLPSCVSRDLIDQLTVEFCYLNSKSTRKKL 360
                 E++GE EK+K + L+GTNL+ALL RLP CVSRDLIDQLTVEFCYLNSKS RKKL
Sbjct: 451 EKEKEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKL 510

Query: 361 VRALFNVPRTSLEL 402
           VRALF+VPRTSLEL
Sbjct: 511 VRALFSVPRTSLEL 524


>gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
           [Medicago truncatula]
          Length = 1212

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/134 (52%), Positives = 88/134 (65%), Gaps = 1/134 (0%)
 Frame = +1

Query: 4   KTQDQSTDMALESDKNQIATQENSEVPADAAIVPXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           K QDQST++  ESDK+Q+ T ++ EV  +++++P                          
Sbjct: 391 KGQDQSTEILPESDKSQLVTLDSGEVSTESSVLPEGESSEIVNDKEEKEKSKELDRDKEK 450

Query: 184 XXXXT-ERRGESEKDKTKGLDGTNLEALLHRLPSCVSRDLIDQLTVEFCYLNSKSTRKKL 360
                 E++GE EK+K + L+GTNL+ALL RLP CVSRDLIDQLTVEFCYLNSKS RKKL
Sbjct: 451 EKEKEGEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKL 510

Query: 361 VRALFNVPRTSLEL 402
           VRALF+VPRTSLEL
Sbjct: 511 VRALFSVPRTSLEL 524


>ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts 2-like [Glycine max]
          Length = 1187

 Score =  128 bits (321), Expect = 5e-28
 Identities = 70/134 (52%), Positives = 85/134 (63%)
 Frame = +1

Query: 1   SKTQDQSTDMALESDKNQIATQENSEVPADAAIVPXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +K QD +T++  ESDK Q  T E+ EV  ++  +P                         
Sbjct: 384 AKNQDLTTEILPESDKGQQTTHESGEVSTESNALPEAESTERVKDKEEKDKSNELDREKE 443

Query: 181 XXXXXTERRGESEKDKTKGLDGTNLEALLHRLPSCVSRDLIDQLTVEFCYLNSKSTRKKL 360
                 +++GE+EKDK + L+GTNL+ALL RLP CVSRDLIDQLTVEFCYLNSKS RKKL
Sbjct: 444 KEKD-NDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKL 502

Query: 361 VRALFNVPRTSLEL 402
           VRALFNVPRTSLEL
Sbjct: 503 VRALFNVPRTSLEL 516


>ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|222864308|gb|EEF01439.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  127 bits (319), Expect = 9e-28
 Identities = 72/134 (53%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
 Frame = +1

Query: 4   KTQDQSTDMALESDKNQIATQENSEVPADAAIVPXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           KTQDQ +++A ESD+ Q +TQ+ +EV A++  +                           
Sbjct: 391 KTQDQQSELAPESDQGQ-STQDMAEVTAESGTLQEGKSTEKGKDKEEKDKEKVKDPEKEK 449

Query: 184 XXXX-TERRGESEKDKTKGLDGTNLEALLHRLPSCVSRDLIDQLTVEFCYLNSKSTRKKL 360
                 ER+GE+EK+K K L+GTNL+ALL RLP CVSRDLIDQLTVEFCY NSKS RKKL
Sbjct: 450 GKEKDAERKGENEKEKLKSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYFNSKSNRKKL 509

Query: 361 VRALFNVPRTSLEL 402
           VRALFNVPRTSLEL
Sbjct: 510 VRALFNVPRTSLEL 523


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