BLASTX nr result

ID: Scutellaria24_contig00030935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030935
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...    57   2e-06
emb|CBI40500.3| unnamed protein product [Vitis vinifera]               54   1e-05

>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +3

Query: 87  MEAISPLYHLNVSSQRNFT---IKFSQLDXXXXXXXXXXXXXXXXXXXXKARHAQIMKMP 257
           ME + PL+HL+   Q   T   IK                         K  HAQ++K+P
Sbjct: 1   MEKLVPLHHLHPPLQNPLTHKPIKTPTSKLYLDSHSSDDSNVITSLTSVKMMHAQMIKLP 60

Query: 258 RKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQN 365
           +K N D   + LI+SYL F DF SAAMVF+VG  +N
Sbjct: 61  QKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRN 96


>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +3

Query: 228 ARHAQIMKMPRKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQN 365
           A HAQ++K     NSD N +TLITSYL   DF+S+AMVFFVGF +N
Sbjct: 83  AMHAQLIKTCSMWNSDSNARTLITSYLELGDFRSSAMVFFVGFARN 128


>emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 225 KARHAQIMKMPRKRNSDLNMQTLITSYLRFRDFQSAAMVFFVGFEQN 365
           K  HAQ++K+P+K N D   + LI+SYL F DF SAAMVF+VG  +N
Sbjct: 440 KMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRN 486


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