BLASTX nr result

ID: Scutellaria24_contig00030839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030839
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40731.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...    62   4e-08
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]    62   4e-08
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...    60   2e-07
ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>emb|CBI40731.3| unnamed protein product [Vitis vinifera]
          Length = 1218

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
 Frame = -1

Query: 391  IPDRFSPLASSIVTAEATYRNKEM-----NGFEKECHKYRPNHSSPS----------AGS 257
            +P+  SPL  S V + A  R K M     N  + E H   P+  +P           A  
Sbjct: 939  MPETESPLNLS-VNSHAQKRRKSMILPSVNPTQAE-HSDAPDAKTPGHIGNSMATRDANR 996

Query: 256  HVTSGLNMDEELQVYCLHCKNPLGLPENDLLVKCSLISTSKAHI 125
             +  G  MD++LQ++C  C+NPLGLPENDL V CSL S+SK H+
Sbjct: 997  RIEFGFGMDKQLQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHL 1040


>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -1

Query: 259  SHVTSGLNMDEELQVYCLHCKNPLGLPENDLLVKCSLISTSKAHI 125
            S V+S  +MD++LQ++C  C+NPLGLPENDL V CSL S+SK H+
Sbjct: 1033 SSVSSCCSMDKQLQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHL 1077


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -1

Query: 259  SHVTSGLNMDEELQVYCLHCKNPLGLPENDLLVKCSLISTSKAHI 125
            S V+S  +MD++LQ++C  C+NPLGLPENDL V CSL S+SK H+
Sbjct: 995  SSVSSCCSMDKQLQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHL 1039


>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
            communis] gi|223551394|gb|EEF52880.1| brca1 interacting
            protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
 Frame = -1

Query: 406  STPIEIPDRFSPLASSIVTAEATYR--------NKEMNGFEKECHKYRPNHSSPSAGSHV 251
            S  +E P  F     ++ + +A  R        + E    E +  +  P ++   A S +
Sbjct: 1003 SPDMESPGCFRSTTDTMASKDANRRIEFDLATDSAEHQSMESKAPRVLPTNNC--APSSI 1060

Query: 250  TSGLNMDEELQVYCLHCKNPLGLPENDLLVKCSLISTSKAHI 125
             S   MD++LQ+ C  CK+PLGLPEN L V+CSL STSK H+
Sbjct: 1061 NSDPVMDQKLQISCSLCKSPLGLPENQLYVRCSLTSTSKIHL 1102


>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
            predicted protein [Populus trichocarpa]
          Length = 1183

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
 Frame = -1

Query: 361  SIVTAEATYRNKEMNGFEKECHKYRPN-HSSP----SAGSHVTSGLN-MDEELQVYCLHC 200
            S VT+  T R  E  G E  C + +   H+SP    S G+   S  + MD+ LQ+ C  C
Sbjct: 1000 SSVTSGDTNRRIEF-GLETNCRERQSTKHASPLLPNSCGTSCASSDSLMDKRLQISCSLC 1058

Query: 199  KNPLGLPENDLLVKCSLISTSKAHI 125
            K+PLG PEN+L V+CSL S+SK H+
Sbjct: 1059 KSPLGRPENNLYVECSLTSSSKVHL 1083


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