BLASTX nr result

ID: Scutellaria24_contig00030836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030836
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi...   217   7e-55
ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi...   212   2e-53
emb|CBI17575.3| unnamed protein product [Vitis vinifera]              209   2e-52
ref|XP_002525094.1| pentatricopeptide repeat-containing protein,...   207   5e-52

>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Vitis vinifera]
          Length = 519

 Score =  217 bits (553), Expect = 7e-55
 Identities = 100/133 (75%), Positives = 118/133 (88%)
 Frame = -3

Query: 399 FKHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAI 220
           FKHDQ+TYTTMLDIFGEARRI SM YVF+QM+EKGIK DAVTYTS+MHW SNDGD++ A+
Sbjct: 62  FKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIERAV 121

Query: 219 ELWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYL 40
            +WKEM+AKGC  TVVSYTAYMKILF+N++V EA DVYKEML+SG +PNC+TYTVLME+L
Sbjct: 122 RVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEHL 181

Query: 39  ASSGKFKEVMEIF 1
             SGK+K  +EIF
Sbjct: 182 TGSGKYKAALEIF 194


>ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 737

 Score =  213 bits (543), Expect = 1e-53
 Identities = 101/133 (75%), Positives = 115/133 (86%)
 Frame = -3

Query: 399 FKHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAI 220
           FKHDQYTYTTMLDIFGEA RISSM YVF+QMKEKGIKIDAVTYTS+MHW SN GDVDGAI
Sbjct: 197 FKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVDGAI 256

Query: 219 ELWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYL 40
           ++WKEM+A GC PTVVSYTAY+KIL +N ++ EA   YK+ML+SGLSPNC TYT+LMEYL
Sbjct: 257 KVWKEMKANGCHPTVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCTYTILMEYL 316

Query: 39  ASSGKFKEVMEIF 1
              GK KE ++IF
Sbjct: 317 IGEGKCKEALDIF 329



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/124 (27%), Positives = 64/124 (51%)
 Frame = -3

Query: 396 KHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAIE 217
           K D  TYT+++     +  +   + V+K+MK  G     V+YT+ +  L ++G ++ A  
Sbjct: 233 KIDAVTYTSLMHWRSNSGDVDGAIKVWKEMKANGCHPTVVSYTAYIKILLDNGQINEATA 292

Query: 216 LWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYLA 37
            +K+M   G  P   +YT  M+ L    K  EA D++ +M ++G+ P+     +L++   
Sbjct: 293 TYKKMLQSGLSPNCCTYTILMEYLIGEGKCKEALDIFSKMQDAGVYPDKAACNILIQKCC 352

Query: 36  SSGK 25
            SG+
Sbjct: 353 KSGE 356


>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 1058

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/133 (75%), Positives = 114/133 (85%)
 Frame = -3

Query: 399 FKHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAI 220
           FKHDQYTYTTMLDIFGEA RISSM YVF+QMKEKGIKIDAVTYTS+MHW SN GDVDGAI
Sbjct: 178 FKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVDGAI 237

Query: 219 ELWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYL 40
           +LWKEM+A GC PTVVSYTAY+KIL +N ++ EA   YK+ML+SGLSPNC  YT+LMEYL
Sbjct: 238 KLWKEMKANGCHPTVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCIYTILMEYL 297

Query: 39  ASSGKFKEVMEIF 1
              GK KE ++IF
Sbjct: 298 IGEGKCKEALDIF 310



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/124 (26%), Positives = 63/124 (50%)
 Frame = -3

Query: 396 KHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAIE 217
           K D  TYT+++     +  +   + ++K+MK  G     V+YT+ +  L ++G ++ A  
Sbjct: 214 KIDAVTYTSLMHWRSNSGDVDGAIKLWKEMKANGCHPTVVSYTAYIKILLDNGQINEATA 273

Query: 216 LWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYLA 37
            +K+M   G  P    YT  M+ L    K  EA D++ +M ++G+ P+     +L++   
Sbjct: 274 TYKKMLQSGLSPNCCIYTILMEYLIGEGKCKEALDIFSKMQDAGVYPDKAACNILIQKCC 333

Query: 36  SSGK 25
            SG+
Sbjct: 334 KSGE 337


>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/144 (69%), Positives = 118/144 (81%), Gaps = 11/144 (7%)
 Frame = -3

Query: 399 FKHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAI 220
           FKHDQ+TYTTMLDIFGEARRI SM YVF+QM+EKGIK DAVTYTS+MHW SNDGD++ A+
Sbjct: 188 FKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIERAV 247

Query: 219 ELWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYL 40
            +WKEM+AKGC  TVVSYTAYMKILF+N++V EA DVYKEML+SG +PNC+TYTVLME+L
Sbjct: 248 RVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEHL 307

Query: 39  ASSG-----------KFKEVMEIF 1
             SG           K+K  +EIF
Sbjct: 308 TGSGKHLLQFSCIACKYKAALEIF 331


>ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535553|gb|EEF37221.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  207 bits (528), Expect = 5e-52
 Identities = 98/133 (73%), Positives = 115/133 (86%)
 Frame = -3

Query: 399 FKHDQYTYTTMLDIFGEARRISSMMYVFKQMKEKGIKIDAVTYTSMMHWLSNDGDVDGAI 220
           FKHDQ+TYTTMLDIFGEA RI SM YVFKQM+EK IKID VTYTS+MHWLS +GDVDGAI
Sbjct: 17  FKHDQFTYTTMLDIFGEAGRIESMNYVFKQMQEKDIKIDTVTYTSLMHWLSRNGDVDGAI 76

Query: 219 ELWKEMRAKGCRPTVVSYTAYMKILFNNRKVVEAGDVYKEMLESGLSPNCHTYTVLMEYL 40
           ++W+EM+ KG   TVVSYTA+MKILF+N++V EA ++YKEMLE G+ PNCHTYTVLMEYL
Sbjct: 77  KIWEEMKEKGLYLTVVSYTAFMKILFDNKRVKEATNIYKEMLECGIPPNCHTYTVLMEYL 136

Query: 39  ASSGKFKEVMEIF 1
             SGK +E +EIF
Sbjct: 137 VVSGKCQEALEIF 149


Top