BLASTX nr result

ID: Scutellaria24_contig00030740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030740
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta...   146   1e-33
ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...   146   1e-33
ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabid...   142   3e-32
ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp....   141   5e-32

>ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Cucumis sativus]
          Length = 826

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/110 (62%), Positives = 86/110 (78%)
 Frame = -1

Query: 331 EGEAEDDLSKEGEINGSSDLSSIPKNKDDEVLESGRLFIRNLPYTATEEELEEHFSKYGT 152
           E +  D      +++     SS  ++K DE+LESGRLF+RNLPY  TEEELEEHF KYGT
Sbjct: 257 EEDHSDHCDDVADVHHMEKSSSTLEDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGT 316

Query: 151 ISQVHIVIDKETRRSKGFAYVLYAIPESAARALEEMDSSIFQGRLLHVMP 2
           +S+VH+V+DK+TRRSKG AY+ Y +PESA RALEE+D+SIFQGRLLHVMP
Sbjct: 317 VSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEELDNSIFQGRLLHVMP 366


>ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
           domain-containing protein 1-like [Cucumis sativus]
          Length = 823

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/110 (62%), Positives = 86/110 (78%)
 Frame = -1

Query: 331 EGEAEDDLSKEGEINGSSDLSSIPKNKDDEVLESGRLFIRNLPYTATEEELEEHFSKYGT 152
           E +  D      +++     SS  ++K DE+LESGRLF+RNLPY  TEEELEEHF KYGT
Sbjct: 257 EEDHSDHCDDVADVHHMEKSSSTLEDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGT 316

Query: 151 ISQVHIVIDKETRRSKGFAYVLYAIPESAARALEEMDSSIFQGRLLHVMP 2
           +S+VH+V+DK+TRRSKG AY+ Y +PESA RALEE+D+SIFQGRLLHVMP
Sbjct: 317 VSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEELDNSIFQGRLLHVMP 366


>ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|222841135|gb|EEE78682.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/113 (62%), Positives = 91/113 (80%)
 Frame = -1

Query: 340 DVSEGEAEDDLSKEGEINGSSDLSSIPKNKDDEVLESGRLFIRNLPYTATEEELEEHFSK 161
           +V++ E  +D   E   N SS L    K++ +E+LE+ RLF+RNLPYTA E+ELEEHFSK
Sbjct: 230 NVAQAEVAEDTHAEDHENPSSTL----KDEKEEILETCRLFVRNLPYTAIEDELEEHFSK 285

Query: 160 YGTISQVHIVIDKETRRSKGFAYVLYAIPESAARALEEMDSSIFQGRLLHVMP 2
           +G ISQVH+V+DK+T+RSKG AY+ Y +PESAARALEE+D+SIFQGRLLHVMP
Sbjct: 286 FGNISQVHLVVDKDTKRSKGLAYIHYTLPESAARALEELDNSIFQGRLLHVMP 338


>ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
           gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid
           binding protein [Arabidopsis thaliana]
          Length = 816

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/119 (56%), Positives = 90/119 (75%)
 Frame = -1

Query: 358 PVDNTLDVSEGEAEDDLSKEGEINGSSDLSSIPKNKDDEVLESGRLFIRNLPYTATEEEL 179
           P+D  ++   G  +DD     E+ G   ++   K   D+VL++GRLF+RNLPYTATEEEL
Sbjct: 252 PIDGDVEAG-GVGKDDDGDAMEVEGDGKVAQESKAVSDDVLDTGRLFVRNLPYTATEEEL 310

Query: 178 EEHFSKYGTISQVHIVIDKETRRSKGFAYVLYAIPESAARALEEMDSSIFQGRLLHVMP 2
            EHFS +G IS+VH+V+DKET+RS+G AY+LY IPE AARA+EE+D+S FQGRLLH++P
Sbjct: 311 MEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAARAMEELDNSSFQGRLLHILP 369


>ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315809|gb|EFH46232.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/119 (57%), Positives = 90/119 (75%)
 Frame = -1

Query: 358 PVDNTLDVSEGEAEDDLSKEGEINGSSDLSSIPKNKDDEVLESGRLFIRNLPYTATEEEL 179
           P+D  ++   G  +DD     E+     ++   K   D+VL++GRLF+RNLPYTATEEEL
Sbjct: 223 PIDGDVEAG-GVDKDDDGDTMEVEADGKVAQELKADSDDVLDTGRLFVRNLPYTATEEEL 281

Query: 178 EEHFSKYGTISQVHIVIDKETRRSKGFAYVLYAIPESAARALEEMDSSIFQGRLLHVMP 2
            EHFSK+G IS+VH+V+DKET+RS+G AY+LY IPE AARA+EE+D+S FQGRLLHV+P
Sbjct: 282 MEHFSKFGEISEVHLVLDKETKRSRGIAYILYPIPECAARAMEELDNSSFQGRLLHVLP 340


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