BLASTX nr result

ID: Scutellaria24_contig00030608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030608
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    93   2e-34
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    92   2e-32
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    89   2e-32
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    87   2e-31
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    85   3e-31

>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 93.2 bits (230), Expect(2) = 2e-34
 Identities = 40/62 (64%), Positives = 52/62 (83%)
 Frame = +3

Query: 3   KHQHILQVARSLLFQSCLPIKFWDECILTAAHLINRTPSSILDNKTPFELLFGKVSDYSY 182
           KHQH+L VARSL+FQS LP+ +W +C+LT  HLINRTPSSIL+N+TP++LLF K  +Y+Y
Sbjct: 667 KHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNY 726

Query: 183 MK 188
            K
Sbjct: 727 FK 728



 Score = 77.4 bits (189), Expect(2) = 2e-34
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +2

Query: 182 YESFGCLCYASTLTAHRHKFQPRAIKCVFIGYPFGVKGYKLLDIANDKIFIS 337
           ++ FGCLC+AST+T +R KFQPRA KC+F+GYP  +KGYK+LD+   K F+S
Sbjct: 727 FKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFVS 778


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 92.4 bits (228), Expect(2) = 2e-32
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   KHQHILQVARSLLFQSCLPIKFWDECILTAAHLINRTPSSILDNKTPFELLFGKVSDYSY 182
           KHQHIL VAR+LLF S LP+ +W +CILTA +LINRTPS  L+NKTPFE+L  K+ DYS+
Sbjct: 574 KHQHILNVARALLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKTPFEILHDKLPDYSH 633

Query: 183 MKV 191
           ++V
Sbjct: 634 LRV 636



 Score = 72.0 bits (175), Expect(2) = 2e-32
 Identities = 34/49 (69%), Positives = 36/49 (73%)
 Frame = +2

Query: 191 FGCLCYASTLTAHRHKFQPRAIKCVFIGYPFGVKGYKLLDIANDKIFIS 337
           FGCLCY STL A+R KF PRA   VF+GYPFG KGYKLLDI    I IS
Sbjct: 637 FGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISIS 685


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 89.4 bits (220), Expect(2) = 2e-32
 Identities = 39/62 (62%), Positives = 51/62 (82%)
 Frame = +3

Query: 3   KHQHILQVARSLLFQSCLPIKFWDECILTAAHLINRTPSSILDNKTPFELLFGKVSDYSY 182
           KHQHIL VAR+L+FQS + + +W +C+LTA  LINRTPS++L NKTPFE+L GK+ DYS 
Sbjct: 729 KHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQ 788

Query: 183 MK 188
           +K
Sbjct: 789 LK 790



 Score = 74.7 bits (182), Expect(2) = 2e-32
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +2

Query: 185 ESFGCLCYASTLTAHRHKFQPRAIKCVFIGYPFGVKGYKLLDIANDKIFIS 337
           ++FGCLCY+ST +  RHKF PR+  CVF+GYPFG KGYKLLD+ ++ + IS
Sbjct: 790 KTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHIS 840


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 86.7 bits (213), Expect(2) = 2e-31
 Identities = 38/62 (61%), Positives = 50/62 (80%)
 Frame = +3

Query: 3   KHQHILQVARSLLFQSCLPIKFWDECILTAAHLINRTPSSILDNKTPFELLFGKVSDYSY 182
           KHQHIL VAR+LLFQS +P+ +W +CILTA  +INRTPS ++ NKT FE+L  KV DY++
Sbjct: 694 KHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTH 753

Query: 183 MK 188
           +K
Sbjct: 754 LK 755



 Score = 73.9 bits (180), Expect(2) = 2e-31
 Identities = 33/51 (64%), Positives = 38/51 (74%)
 Frame = +2

Query: 185 ESFGCLCYASTLTAHRHKFQPRAIKCVFIGYPFGVKGYKLLDIANDKIFIS 337
           +SFGCLCYAST    RHKF+ RA  C F+GYP G KGYKLLD+ +  IFIS
Sbjct: 755 KSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFIS 805


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 84.7 bits (208), Expect(2) = 3e-31
 Identities = 35/62 (56%), Positives = 50/62 (80%)
 Frame = +3

Query: 3   KHQHILQVARSLLFQSCLPIKFWDECILTAAHLINRTPSSILDNKTPFELLFGKVSDYSY 182
           KHQH+L VAR+L+FQS +P+++W +C+LTAA LINRTPS +L NK+P+E+L GK   Y  
Sbjct: 678 KHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQ 737

Query: 183 MK 188
           ++
Sbjct: 738 LR 739



 Score = 75.5 bits (184), Expect(2) = 3e-31
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +2

Query: 188 SFGCLCYASTLTAHRHKFQPRAIKCVFIGYPFGVKGYKLLDIANDKIFIS 337
           +FGCLCY ST    RHKF PR+  CVF+GYP G KGYKLLD+ ++KI+IS
Sbjct: 740 TFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYIS 789


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