BLASTX nr result

ID: Scutellaria24_contig00030606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030606
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding prote...    84   1e-14
emb|CBI21312.3| unnamed protein product [Vitis vinifera]               84   1e-14
emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]    84   1e-14
ref|XP_002298650.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002512890.1| double-stranded RNA binding protein, putativ...    79   5e-13

>ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding protein 5 [Vitis vinifera]
          Length = 484

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/55 (72%), Positives = 47/55 (85%)
 Frame = +2

Query: 86  PGHVPVFTSTVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRSEYINLTSHFTE 250
           PGHVPVFT TVELAGM+F+GE+AKTKKQAEKNAAIAAWS+LKR   +   SH ++
Sbjct: 116 PGHVPVFTCTVELAGMNFTGESAKTKKQAEKNAAIAAWSALKRVPNLGSLSHLSK 170


>emb|CBI21312.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/55 (72%), Positives = 47/55 (85%)
 Frame = +2

Query: 86  PGHVPVFTSTVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRSEYINLTSHFTE 250
           PGHVPVFT TVELAGM+F+GE+AKTKKQAEKNAAIAAWS+LKR   +   SH ++
Sbjct: 113 PGHVPVFTCTVELAGMNFTGESAKTKKQAEKNAAIAAWSALKRVPNLGSLSHLSK 167


>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
          Length = 552

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/55 (72%), Positives = 47/55 (85%)
 Frame = +2

Query: 86  PGHVPVFTSTVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRSEYINLTSHFTE 250
           PGHVPVFT TVELAGM+F+GE+AKTKKQAEKNAAIAAWS+LKR   +   SH ++
Sbjct: 184 PGHVPVFTCTVELAGMNFTGESAKTKKQAEKNAAIAAWSALKRVPNLGSLSHLSK 238


>ref|XP_002298650.1| predicted protein [Populus trichocarpa] gi|222845908|gb|EEE83455.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +2

Query: 86  PGHVPVFTSTVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKR 214
           PGHVPVFT TVELAGM+F+GE AKTKKQAEKNAAIAAWS+LKR
Sbjct: 113 PGHVPVFTCTVELAGMNFTGEPAKTKKQAEKNAAIAAWSALKR 155


>ref|XP_002512890.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223547901|gb|EEF49393.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 477

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +2

Query: 86  PGHVPVFTSTVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKR 214
           PGHVP FT TVELAGM+F+GE AKTKKQAEKNAAIAAWS+LKR
Sbjct: 116 PGHVPTFTCTVELAGMNFTGEPAKTKKQAEKNAAIAAWSALKR 158


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