BLASTX nr result

ID: Scutellaria24_contig00030554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030554
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   126   2e-27
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
gb|ABA18111.1| pentatricopeptide repeat protein [Arabidopsis are...   115   5e-24

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  154 bits (390), Expect = 6e-36
 Identities = 79/153 (51%), Positives = 103/153 (67%)
 Frame = -3

Query: 459 LSGERLHLVPEKVVRETKSRGLYPXXXXXXXXXXLYARNGLFSKALGIWDEMMNSSFVPE 280
           LS +RL  V ++++ E KS G  P           YA NGLF KA  +WDE++NSSF P 
Sbjct: 65  LSRKRLPHVAQELLFEMKSEGFLPNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPN 124

Query: 279 VEVVSQLIFIYGSMWDFNMVTRILQQMQMKDAKLVRDIFSLAISYFGKSGQLECMEIMIK 100
           +++VS+LI  YG M  F  VTRIL Q+  +D   + +++SLAIS FGK GQLE ME  +K
Sbjct: 125 IQIVSKLIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALK 184

Query: 99  DMVSMGYPVDSATGNAYVLYYSAFGSLADAEAA 1
           +MVS G+PVDSATGNA++ YYS FGSL + EAA
Sbjct: 185 EMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAA 217


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/157 (42%), Positives = 91/157 (57%)
 Frame = -3

Query: 471 VTHGLSGERLHLVPEKVVRETKSRGLYPXXXXXXXXXXLYARNGLFSKALGIWDEMMNSS 292
           +   L  +R   + ++++ E KS+G              YA NGL  +A  IW  M+N S
Sbjct: 65  LVQNLHSKRTPHLAQEILLEMKSQGYVLNNPTLSAILLCYADNGLLPQAQAIWKHMLNGS 124

Query: 291 FVPEVEVVSQLIFIYGSMWDFNMVTRILQQMQMKDAKLVRDIFSLAISYFGKSGQLECME 112
           F P +++VS+LI  Y     FN V  IL Q+   +  L+ + +SLAIS FGK GQL+ ME
Sbjct: 125 FTPSIQIVSRLIDAYSKKGHFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLME 184

Query: 111 IMIKDMVSMGYPVDSATGNAYVLYYSAFGSLADAEAA 1
             +KDMV  G+PVD ATGNA++ YYS  GSL D E+A
Sbjct: 185 NALKDMVLRGFPVDYATGNAFIRYYSIHGSLTDMESA 221


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  125 bits (315), Expect = 3e-27
 Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
 Frame = -3

Query: 519 KYEDYVDGRGACR--SGLVTHGLSGERLHLVPEKVVRETKSRGLYPXXXXXXXXXXLYAR 346
           K +  V G+  C   + L+       R HL  E+++ E K  G  P           YA 
Sbjct: 48  KRDQGVFGKETCADCASLIQTLCKHRRPHLA-EELLLELKCEGFLPDNRTLSAMMLCYAD 106

Query: 345 NGLFSKALGIWDEMMNSSFVPEVEVVSQLIFIYGSMWDFNMVTRILQQMQ-MKDAKLVRD 169
           +GL  +A  IW+EM+ SSFVP V+V+S LI IY     F+ V +IL Q+  ++    +  
Sbjct: 107 SGLLPQAQAIWEEMLYSSFVPSVQVISDLIDIYAKSGLFDEVIKILDQLSSLRTFDFLPQ 166

Query: 168 IFSLAISYFGKSGQLECMEIMIKDMVSMGYPVDSATGNAYVLYYSAFGSLADAEAA 1
           ++SLAIS FGK GQLE ME  +K MVS G+ VDSATGNA+V+YYS  GSLA+ EAA
Sbjct: 167 VYSLAISCFGKGGQLELMEDTLKKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAA 222


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/168 (38%), Positives = 101/168 (60%)
 Frame = -3

Query: 504 VDGRGACRSGLVTHGLSGERLHLVPEKVVRETKSRGLYPXXXXXXXXXXLYARNGLFSKA 325
           VD      +  V   LS  R+ ++ +++  E KS G              Y  +G   +A
Sbjct: 15  VDDSFNINNSQVIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQA 74

Query: 324 LGIWDEMMNSSFVPEVEVVSQLIFIYGSMWDFNMVTRILQQMQMKDAKLVRDIFSLAISY 145
             +W+EM+NS F P V+V+S+L   YG M  F+ +T++L Q++++ + L+ + +SLAIS 
Sbjct: 75  QAMWEEMLNSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISC 134

Query: 144 FGKSGQLECMEIMIKDMVSMGYPVDSATGNAYVLYYSAFGSLADAEAA 1
           FGK  QLE ME  +++MVS G+ V+SATGN++++YYS FGSL + E A
Sbjct: 135 FGKHKQLELMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETA 182


>gb|ABA18111.1| pentatricopeptide repeat protein [Arabidopsis arenosa]
          Length = 419

 Score =  115 bits (287), Expect = 5e-24
 Identities = 67/153 (43%), Positives = 93/153 (60%)
 Frame = -3

Query: 459 LSGERLHLVPEKVVRETKSRGLYPXXXXXXXXXXLYARNGLFSKALGIWDEMMNSSFVPE 280
           LS  RL  V  ++  +TKS  L P           +A NG   +A  IWDE++NSSFVP+
Sbjct: 61  LSQRRLPDVAHEIFIQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEILNSSFVPD 120

Query: 279 VEVVSQLIFIYGSMWDFNMVTRILQQMQMKDAKLVRDIFSLAISYFGKSGQLECMEIMIK 100
           V VVS+LI  Y  +  F+ V +I + +  + + L+  ++SLAIS FGK+GQLE ME +I+
Sbjct: 121 VFVVSKLISAYEQLGFFDEVAKITKDVAARHSTLLPVVYSLAISCFGKNGQLELMEGVIE 180

Query: 99  DMVSMGYPVDSATGNAYVLYYSAFGSLADAEAA 1
           +M S G  +DSAT NA V Y+S FG+L   E A
Sbjct: 181 EMDSKGMSLDSATANAIVRYFSFFGTLDKIEHA 213


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