BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030496
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   150   8e-35
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...   145   3e-33
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 145   3e-33

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  171 bits (432), Expect = 7e-41
 Identities = 84/121 (69%), Positives = 99/121 (81%)
 Frame = +2

Query: 2   HMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSS 181
           +MY +CG  +G V KVFDRI  RDQVSWNSFI ALC++EKWE ALEAFR M +E +E SS
Sbjct: 136 NMYGKCG-GIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSS 194

Query: 182 FTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDDRKTFTDNSLMAMYAKLGRIHDAKIIF 361
           FTLVSV LACSNL    GLRLGKQ+HGYSLR  D+KTFT+N+LMAMYAKLGR+ D+K +F
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALF 254

Query: 362 D 364
           +
Sbjct: 255 E 255



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
 Frame = +2

Query: 5   MYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSSF 184
           MYA+ G  V     +F+    RD VSWN+ I++  + +++  AL  FRLM LEG+E    
Sbjct: 240 MYAKLGR-VDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGV 298

Query: 185 TLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDD--RKTFTDNSLMAMYAKLGRIHDAKII 358
           T+ SV+ ACS+L R D   +GK++H Y LR +D    +F  ++L+ MY    ++   + +
Sbjct: 299 TIASVLPACSHLERLD---VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRV 355

Query: 359 FD 364
           FD
Sbjct: 356 FD 357


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/117 (64%), Positives = 97/117 (82%)
 Frame = +2

Query: 2   HMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSS 181
           +MY +CG  +G  +KVFDRI +RDQVSWNS I+ALC++E+WE+A++AFRLM +EG EPSS
Sbjct: 55  NMYGKCG-GLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSS 113

Query: 182 FTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDDRKTFTDNSLMAMYAKLGRIHDAK 352
           FTLVS+ LACSNL +RDGL LGKQ+HG   R    +TF++N+LMAMYAKLGR+ DAK
Sbjct: 114 FTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAK 170



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
 Frame = +2

Query: 5   MYAQCGT--DVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPS 178
           MYA+ G   D   +  +F+    RD V+WNS I++  + E++  AL   RLM LEG++P 
Sbjct: 159 MYAKLGRLDDAKSLLVLFE---DRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPD 215

Query: 179 SFTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDD--RKTFTDNSLMAMYAKLGRIHDAK 352
             T  SV+ ACS+L   D LR GK++H Y+LR DD    +F  ++L+ MY   G++   +
Sbjct: 216 GVTFASVLPACSHL---DLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGR 272

Query: 353 IIFD 364
           ++FD
Sbjct: 273 LVFD 276


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/120 (60%), Positives = 92/120 (76%)
 Frame = +2

Query: 2   HMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSS 181
           + Y +C +++  V+KVFDRI +RD VSWNS I+A C+ ++WELALEAFR M  E +EPSS
Sbjct: 121 NFYGKC-SELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSS 179

Query: 182 FTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDDRKTFTDNSLMAMYAKLGRIHDAKIIF 361
           FTLVS V+ACSNL + +GLRLGKQ+HGY  R     TFT+N+LM MYA LGR+ DAK +F
Sbjct: 180 FTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLF 239



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
 Frame = +2

Query: 5   MYAQCGT--DVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPS 178
           MYA  G   D   +FK+F+    R+ +SWN+ I++  + E++  AL + R M LEG++P 
Sbjct: 225 MYANLGRLDDAKFLFKLFE---DRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPD 281

Query: 179 SFTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDD--RKTFTDNSLMAMYAKLGRIHDAK 352
             TL SV+ ACS L   + L  GK++H Y+LR  D    +F  ++L+ MY   G++   +
Sbjct: 282 GVTLASVLPACSYL---EMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGR 338

Query: 353 IIFD 364
            +FD
Sbjct: 339 RVFD 342



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = +2

Query: 5   MYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAF-RLMGLEGIEPSS 181
           MY  CG  VG   +VFD I +R    WN+ I    + E  E AL  F  ++ + G+ P++
Sbjct: 327 MYCNCG-QVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNT 385

Query: 182 FTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFD-DRKTFTDNSLMAMYAKLGRIHDAKII 358
            T+ S+V A +   R +     + +HGY ++ D +R  +  N+LM MY+++ ++  +K I
Sbjct: 386 TTMASIVPASA---RCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTI 442

Query: 359 FD 364
           FD
Sbjct: 443 FD 444


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/119 (58%), Positives = 92/119 (77%)
 Frame = +2

Query: 2   HMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSS 181
           ++Y +CG D G V+KVFDRI +R+QVSWNS I++LC +EKWE+ALEAFR M  E +EPSS
Sbjct: 141 NLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199

Query: 182 FTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDDRKTFTDNSLMAMYAKLGRIHDAKII 358
           FTLVSVV ACSNL   +GL +GKQVH Y LR  +  +F  N+L+AMY KLG++  +K++
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVL 258



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
 Frame = +2

Query: 68  RDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSSFTLVSVVLACSNLNRRDGLRLG 247
           RD V+WN+ +++LC+ E+   ALE  R M LEG+EP  FT+ SV+ ACS+L   + LR G
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTG 321

Query: 248 KQVHGYSLRFD--DRKTFTDNSLMAMYAKLGRIHDAKIIFD 364
           K++H Y+L+    D  +F  ++L+ MY    ++   + +FD
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +2

Query: 5   MYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSSF 184
           MYA+CG  +    KVFD+IPQ++ ++WN  I A   +   + A++  R+M ++G++P+  
Sbjct: 561 MYAKCGC-LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619

Query: 185 TLVSVVLACSNLNRRD-GLRL 244
           T +SV  ACS+    D GLR+
Sbjct: 620 TFISVFAACSHSGMVDEGLRI 640


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/119 (58%), Positives = 92/119 (77%)
 Frame = +2

Query: 2   HMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSS 181
           ++Y +CG D G V+KVFDRI +R+QVSWNS I++LC +EKWE+ALEAFR M  E +EPSS
Sbjct: 141 NLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199

Query: 182 FTLVSVVLACSNLNRRDGLRLGKQVHGYSLRFDDRKTFTDNSLMAMYAKLGRIHDAKII 358
           FTLVSVV ACSNL   +GL +GKQVH Y LR  +  +F  N+L+AMY KLG++  +K++
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVL 258



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
 Frame = +2

Query: 68  RDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSSFTLVSVVLACSNLNRRDGLRLG 247
           RD V+WN+ +++LC+ E+   ALE  R M LEG+EP  FT+ SV+ ACS+L   + LR G
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTG 321

Query: 248 KQVHGYSLRFD--DRKTFTDNSLMAMYAKLGRIHDAKIIFD 364
           K++H Y+L+    D  +F  ++L+ MY    ++   + +FD
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +2

Query: 5   MYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEGIEPSSF 184
           MYA+CG  +    KVFD+IPQ++ ++WN  I A   +   + A++  R+M ++G++P+  
Sbjct: 561 MYAKCGC-LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619

Query: 185 TLVSVVLACSNLNRRD-GLRL 244
           T +SV  ACS+    D GLR+
Sbjct: 620 TFISVFAACSHSGMVDEGLRI 640