BLASTX nr result

ID: Scutellaria24_contig00030248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030248
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   112   2e-23
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   112   4e-23
ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   108   4e-22

>ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|222868906|gb|EEF06037.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/85 (61%), Positives = 72/85 (84%)
 Frame = +1

Query: 1   ATVRPNRVSSSPVCCVEFNPFGGRTLAVGCADRRIYGYDVRRMAEPVFTLDGHQKAVTYT 180
           ATV+P+ V  S VCCVEFNPFGG  +A+GCADR++YGYD+R MA+PVF LDGH+K VTY 
Sbjct: 58  ATVQPS-VRRSAVCCVEFNPFGGPIVAIGCADRKVYGYDLRMMADPVFVLDGHRKTVTYI 116

Query: 181 RFLDSNTIVSSAIDGTLVMWDTESN 255
           +FLD+ T+VS++IDG L +W+++++
Sbjct: 117 KFLDNATLVSASIDGCLKLWNSDNS 141


>ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|222859492|gb|EEE97039.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/85 (62%), Positives = 69/85 (81%)
 Frame = +1

Query: 1   ATVRPNRVSSSPVCCVEFNPFGGRTLAVGCADRRIYGYDVRRMAEPVFTLDGHQKAVTYT 180
           ATV+P  V  S VCCVEFNPFGG  +AVGCADRR+YGYD+R   +PVF LDGH+K VTY 
Sbjct: 58  ATVQPG-VGRSAVCCVEFNPFGGPIVAVGCADRRVYGYDIRMTGDPVFVLDGHRKTVTYI 116

Query: 181 RFLDSNTIVSSAIDGTLVMWDTESN 255
           +FLD+ T+VS++IDG L +WD++++
Sbjct: 117 KFLDNVTLVSASIDGCLKLWDSDNS 141


>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   ATVRPNRVSSS-PVCCVEFNPFGGRTLAVGCADRRIYGYDVRRMAEPVFTLDGHQKAVTY 177
           ATV+P+  SS   VC VEFNPFGG  +AVGCADRR+YGYDVR +  PVF LDGH+K VTY
Sbjct: 242 ATVKPSVTSSCRAVCSVEFNPFGGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKKTVTY 301

Query: 178 TRFLDSNTIVSSAIDGTLVMWDTESN 255
            RF+D+ T+ S+ IDG L +W+ + +
Sbjct: 302 VRFMDNGTLASAGIDGCLKLWNLQDS 327


>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/80 (65%), Positives = 60/80 (75%)
 Frame = +1

Query: 1   ATVRPNRVSSSPVCCVEFNPFGGRTLAVGCADRRIYGYDVRRMAEPVFTLDGHQKAVTYT 180
           A VRP+    S VCCVEFNPFGG  +AVGCADRR YGYDVR+M +PV   DGHQK VTY 
Sbjct: 200 AKVRPSG-GGSAVCCVEFNPFGGPLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTVTYV 258

Query: 181 RFLDSNTIVSSAIDGTLVMW 240
           RFLD +T+V+S  DG L +W
Sbjct: 259 RFLDQHTMVTSGTDGCLRLW 278


>ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           COP1-like [Cucumis sativus]
          Length = 384

 Score =  108 bits (271), Expect = 4e-22
 Identities = 50/83 (60%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   ATVRPNRVSSSPVCCVEFNPFGGRTLAVGCADRRIYGYDVRRMAEPVFTLDGHQKAVTYT 180
           A V+P+ V S+ VCCVEFNPFGG  +AVGCADR+ YGYD R+M EPV   +GH K VTY 
Sbjct: 193 AVVQPSVVRSA-VCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYV 251

Query: 181 RFLDSNTIVSSAIDGTLVMWDTE 249
           +F+D  T+VS++ DG+L MW TE
Sbjct: 252 KFVDGGTVVSASTDGSLKMWKTE 274


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