BLASTX nr result

ID: Scutellaria24_contig00030204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030204
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   127   1e-27
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   121   5e-26
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   120   1e-25
gb|AFK34970.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...   119   3e-25

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/68 (83%), Positives = 65/68 (95%)
 Frame = -3

Query: 510 EGSFQLTLALGDSWSHASTNRIILYWNGNERYAYIDKSPSLRSASAPYAVTGRGIRNSTS 331
           EGSFQLTLALGDSWSH+ TNR+ILYWNG+ERYAYIDKSPSLRSASAPY+VTG+GIR +TS
Sbjct: 279 EGSFQLTLALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATS 338

Query: 330 NCKRVKLM 307
            CKR+K+M
Sbjct: 339 KCKRIKIM 346


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/68 (82%), Positives = 65/68 (95%)
 Frame = -3

Query: 510 EGSFQLTLALGDSWSHASTNRIILYWNGNERYAYIDKSPSLRSASAPYAVTGRGIRNSTS 331
           EGSFQLTLALGDSWSH+ TNRIILYWNG+ER+AYIDKSPSL+SASAPY+VT RGIRNSTS
Sbjct: 280 EGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTS 339

Query: 330 NCKRVKLM 307
           + KR+K++
Sbjct: 340 SSKRIKMV 347


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = -3

Query: 510 EGSFQLTLALGDSWSHASTNRIILYWNGNERYAYIDKSPSLRSASAPYAVTGRGIRNSTS 331
           EGSFQL LALG+SWSH+ TNRIILYWN NERYAYIDKSPSL+SA+APY+VT  GIRNS+S
Sbjct: 279 EGSFQLGLALGESWSHSCTNRIILYWNSNERYAYIDKSPSLKSATAPYSVTRGGIRNSSS 338

Query: 330 NCKRVKLM 307
           NCKRVK+M
Sbjct: 339 NCKRVKMM 346


>gb|AFK34970.1| unknown [Medicago truncatula]
          Length = 269

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/68 (80%), Positives = 64/68 (94%)
 Frame = -3

Query: 510 EGSFQLTLALGDSWSHASTNRIILYWNGNERYAYIDKSPSLRSASAPYAVTGRGIRNSTS 331
           E SFQLTLALGDSWSH+ TNRIILYWNG+ER+AYIDKSPSL+SASAPY+VT RGIRNSTS
Sbjct: 202 ESSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTS 261

Query: 330 NCKRVKLM 307
           + KR+K++
Sbjct: 262 SSKRIKMV 269


>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/68 (80%), Positives = 64/68 (94%)
 Frame = -3

Query: 510 EGSFQLTLALGDSWSHASTNRIILYWNGNERYAYIDKSPSLRSASAPYAVTGRGIRNSTS 331
           EGSFQLTLALGDSWSH+ TNRIILYWN +ER+AYIDKSPSL+SASAPY+VT RGIRNSTS
Sbjct: 280 EGSFQLTLALGDSWSHSCTNRIILYWNDDERHAYIDKSPSLKSASAPYSVTSRGIRNSTS 339

Query: 330 NCKRVKLM 307
           + KR+K++
Sbjct: 340 SSKRIKMV 347