BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030203
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containi...   131   8e-29
emb|CBI35592.3| unnamed protein product [Vitis vinifera]              131   8e-29
emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]   131   8e-29
ref|NP_187385.1| pentatricopeptide repeat-containing protein [Ar...    81   1e-13
ref|NP_193742.1| pentatricopeptide repeat-containing protein [Ar...    78   1e-12

>ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
            mitochondrial [Vitis vinifera]
          Length = 876

 Score =  131 bits (329), Expect = 8e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
 Frame = -2

Query: 554  KDCGGHPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYT 375
            K CG    D+Y FL+ GLC+ GRI EAD L Q MV+HGL PD  I +S+I   CK+  Y 
Sbjct: 726  KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYD 784

Query: 374  RAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYI 195
               E++K  + +  VPSF+SY  VI GL+NEGR QEA+ L+SDL+   G+E+   + P I
Sbjct: 785  NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 844

Query: 194  NFLVKREE--PCRSFEFLSFIEKRGYNERPIV 105
             FL+K EE  P +  + +  IE+  Y ERPI+
Sbjct: 845  EFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 876



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
 Frame = -2

Query: 524 YKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRFV 345
           Y  LI GLC  GR+ EA  L Q+MVE G  P       +I   C      +A + +    
Sbjct: 245 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 304

Query: 344 GHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVKREEPC 165
              CVP+  +Y+ +I  L  EG+ +EA  +   +L              IN   K     
Sbjct: 305 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 364

Query: 164 RSFEFLSFIEK-------RGYNE 117
            +F+ LS +EK       R YNE
Sbjct: 365 SAFQLLSVMEKGNCKPNIRTYNE 387



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/138 (24%), Positives = 70/138 (50%)
 Frame = -2

Query: 539 HPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEW 360
           H F+ +   +  L +  +++EA+ ++ +M+++GL P       +I   C++ +   + + 
Sbjct: 523 HTFNCF---LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 579

Query: 359 IKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVK 180
           ++R    GC P+  +Y+ +I GL N GR +EAE ++  + S     +H      +   VK
Sbjct: 580 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 639

Query: 179 REEPCRSFEFLSFIEKRG 126
                R+F+ +S + K G
Sbjct: 640 AGRLDRAFQIVSTMVKNG 657


>emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  131 bits (329), Expect = 8e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
 Frame = -2

Query: 554  KDCGGHPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYT 375
            K CG    D+Y FL+ GLC+ GRI EAD L Q MV+HGL PD  I +S+I   CK+  Y 
Sbjct: 733  KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYD 791

Query: 374  RAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYI 195
               E++K  + +  VPSF+SY  VI GL+NEGR QEA+ L+SDL+   G+E+   + P I
Sbjct: 792  NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 851

Query: 194  NFLVKREE--PCRSFEFLSFIEKRGYNERPIV 105
             FL+K EE  P +  + +  IE+  Y ERPI+
Sbjct: 852  EFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 883



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
 Frame = -2

Query: 524 YKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRFV 345
           Y  LI GLC  GR+ EA  L Q+MVE G  P       +I   C      +A + +    
Sbjct: 268 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 327

Query: 344 GHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVKREEPC 165
              CVP+  +Y+ +I  L  EG+ +EA  +   +L              IN   K     
Sbjct: 328 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 387

Query: 164 RSFEFLSFIEK-------RGYNE 117
            +F+ LS +EK       R YNE
Sbjct: 388 SAFQLLSVMEKGNCKPNIRTYNE 410



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/138 (24%), Positives = 70/138 (50%)
 Frame = -2

Query: 539 HPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEW 360
           H F+ +   +  L +  +++EA+ ++ +M+++GL P       +I   C++ +   + + 
Sbjct: 546 HTFNCF---LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 602

Query: 359 IKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVK 180
           ++R    GC P+  +Y+ +I GL N GR +EAE ++  + S     +H      +   VK
Sbjct: 603 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 662

Query: 179 REEPCRSFEFLSFIEKRG 126
                R+F+ +S + K G
Sbjct: 663 AGRLDRAFQIVSTMVKNG 680


>emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  131 bits (329), Expect = 8e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
 Frame = -2

Query: 554  KDCGGHPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYT 375
            K CG    D+Y FL+ GLC+ GRI EAD L Q MV+HGL PD  I +S+I   CK+  Y 
Sbjct: 683  KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYD 741

Query: 374  RAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYI 195
               E++K  + +  VPSF+SY  VI GL+NEGR QEA+ L+SDL+   G+E+   + P I
Sbjct: 742  NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 801

Query: 194  NFLVKREE--PCRSFEFLSFIEKRGYNERPIV 105
             FL+K EE  P +  + +  IE+  Y ERPI+
Sbjct: 802  EFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 833



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
 Frame = -2

Query: 524 YKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRFV 345
           Y  LI GLC  GR+ EA  L Q+MVE G  P       +I   C      +A + +    
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 261

Query: 344 GHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVKREEPC 165
              CVP+  +Y+ +I  L  EG+ +EA  +   +L              IN   K     
Sbjct: 262 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 321

Query: 164 RSFEFLSFIEK-------RGYNE 117
            +F+ LS +EK       R YNE
Sbjct: 322 SAFQLLSVMEKGNCKPNIRTYNE 344



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/138 (24%), Positives = 70/138 (50%)
 Frame = -2

Query: 539 HPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEW 360
           H F+ +   +  L +  +++EA+ ++ +M+++GL P       +I   C++ +   + + 
Sbjct: 480 HTFNCF---LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 536

Query: 359 IKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVK 180
           ++R    GC P+  +Y+ +I GL N GR +EAE ++  + S     +H      +   VK
Sbjct: 537 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 596

Query: 179 REEPCRSFEFLSFIEKRG 126
                R+F+ +S + K G
Sbjct: 597 AGRLDRAFQIVSTMVKNG 614


>ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g07290, mitochondrial; Flags: Precursor
            gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein
            [Arabidopsis thaliana] gi|332641002|gb|AEE74523.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 880

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/136 (33%), Positives = 75/136 (55%)
 Frame = -2

Query: 518  FLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRFVGH 339
            FL+T LC+ GR  E++ L+Q ++E G+  +  +   M S  C    +T+  E I   +  
Sbjct: 744  FLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMES-YCSKKKHTKCMELITLVLKS 802

Query: 338  GCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVKREEPCRS 159
            G VPSF S+  VI GL+ EG  + A  L+ +LL+S GV + S +L Y+  L++ +E    
Sbjct: 803  GFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDC 862

Query: 158  FEFLSFIEKRGYNERP 111
             E +  +++    ERP
Sbjct: 863  SEVIDLVDQLHCRERP 878



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/132 (29%), Positives = 56/132 (42%)
 Frame = -2

Query: 524 YKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRFV 345
           Y  LI GLC  GR+ EA  L  QM E G  P       +I  LC      +A       +
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328

Query: 344 GHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVKREEPC 165
             GC P+  +Y+ +I GL  +G+ +EA  +   ++              IN   K     
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388

Query: 164 RSFEFLSFIEKR 129
            +FE L+ +EKR
Sbjct: 389 PAFELLTVMEKR 400


>ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098720|sp|O49436.1|PP327_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
           gi|2827663|emb|CAA16617.1| membrane-associated
           salt-inducible-like protein [Arabidopsis thaliana]
           gi|7268804|emb|CAB79009.1| membrane-associated
           salt-inducible-like protein [Arabidopsis thaliana]
           gi|58013024|gb|AAW62965.1| embryo-defective 1025
           [Arabidopsis thaliana] gi|332658871|gb|AEE84271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/135 (33%), Positives = 72/135 (53%)
 Frame = -2

Query: 524 YKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRFV 345
           Y  L+ GLC+  RI EA +L+ +M   G +P   I   +I  LCK  D TR  + +    
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284

Query: 344 GHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAGVEDHSAILPYINFLVKREEPC 165
             GCVP+  +Y+++I GL  +G+  +A  L+  ++SS  + +       IN LVK+    
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344

Query: 164 RSFEFLSFIEKRGYN 120
            +   LS +E+RGY+
Sbjct: 345 DAVRLLSSMEERGYH 359



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/88 (31%), Positives = 49/88 (55%)
 Frame = -2

Query: 527 VYKFLITGLCRRGRISEADILIQQMVEHGLTPDNDICASMISQLCKSDDYTRAQEWIKRF 348
           +Y  LI+GL + G+  EA  L ++M E G  P+  + + ++  LC+      A+E + R 
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 347 VGHGCVPSFSSYSSVIVGLQNEGRFQEA 264
           +  GC+P+  +YSS++ G    G  +EA
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEA 451