BLASTX nr result

ID: Scutellaria24_contig00030134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030134
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]   135   3e-30
ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   135   3e-30
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   130   1e-28
ref|NP_191599.1| Mitochondrial transcription termination factor ...   130   1e-28
ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
          Length = 545

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/105 (57%), Positives = 82/105 (78%)
 Frame = -2

Query: 317 ELEQRFEYLLQCGIEYSKLCAIVVFSARILNQKRSYLEKKIQYLCTEMGSSLKFLDAFPG 138
           EL++RF  LL  G+E+SKLC ++ FSA+ILNQK   LE+K+ +L  EMG SL++LD FP 
Sbjct: 418 ELQERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPA 477

Query: 137 YLCHDLENRIKPRYRFHKWLKDQGFCEKEYAISTIIASSEKTFIA 3
           YLC +L+NRIKPRYR H WL + G C K Y+++++IA+SEK+FIA
Sbjct: 478 YLCFNLDNRIKPRYRXHVWLAENGLCTKNYSLASMIATSEKSFIA 522


>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  135 bits (340), Expect = 3e-30
 Identities = 60/105 (57%), Positives = 82/105 (78%)
 Frame = -2

Query: 317 ELEQRFEYLLQCGIEYSKLCAIVVFSARILNQKRSYLEKKIQYLCTEMGSSLKFLDAFPG 138
           EL++RF  LL  G+E+SKLC ++ FSA+ILNQK   LE+K+ +L  EMG SL++LD FP 
Sbjct: 434 ELQERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPA 493

Query: 137 YLCHDLENRIKPRYRFHKWLKDQGFCEKEYAISTIIASSEKTFIA 3
           YLC +L+NRIKPRYR H WL + G C K Y+++++IA+SEK+FIA
Sbjct: 494 YLCFNLDNRIKPRYRCHVWLAENGLCTKNYSLASMIATSEKSFIA 538


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
           lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
           ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/105 (55%), Positives = 80/105 (76%)
 Frame = -2

Query: 317 ELEQRFEYLLQCGIEYSKLCAIVVFSARILNQKRSYLEKKIQYLCTEMGSSLKFLDAFPG 138
           EL+ RF+ LL  GI +SK+C ++  + +ILNQK   ++ K+++LC EMG SL +LD FP 
Sbjct: 427 ELQDRFQILLDSGIIFSKICLLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLDVFPA 486

Query: 137 YLCHDLENRIKPRYRFHKWLKDQGFCEKEYAISTIIASSEKTFIA 3
           YLC DLENRI PR+RFHKWL ++G  EK Y+I++I+A+SEK FIA
Sbjct: 487 YLCFDLENRISPRFRFHKWLVEKGLSEKSYSIASIVATSEKAFIA 531


>ref|NP_191599.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|7287988|emb|CAB81826.1|
           putative protein [Arabidopsis thaliana]
           gi|332646534|gb|AEE80055.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 558

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/105 (55%), Positives = 80/105 (76%)
 Frame = -2

Query: 317 ELEQRFEYLLQCGIEYSKLCAIVVFSARILNQKRSYLEKKIQYLCTEMGSSLKFLDAFPG 138
           EL  RF+ LL  GI +SK+C ++  + +ILNQK   ++ K+++LC EMG SL +L+ FP 
Sbjct: 427 ELHDRFQILLNSGIIFSKICMLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPA 486

Query: 137 YLCHDLENRIKPRYRFHKWLKDQGFCEKEYAISTIIASSEKTFIA 3
           YLC DLENRI PR+RFHKWL ++GF EK Y+I++I+A+SEK FIA
Sbjct: 487 YLCFDLENRISPRFRFHKWLVEKGFSEKSYSIASIVATSEKAFIA 531


>ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|222835189|gb|EEE73624.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  129 bits (324), Expect = 2e-28
 Identities = 55/105 (52%), Positives = 86/105 (81%)
 Frame = -2

Query: 317 ELEQRFEYLLQCGIEYSKLCAIVVFSARILNQKRSYLEKKIQYLCTEMGSSLKFLDAFPG 138
           EL++R + LL+ GI +SKLC+++    +IL+QK   L++K+ YLC +M SSL++LD FP 
Sbjct: 431 ELQERVDCLLRYGIVFSKLCSMIRMMPKILSQKPEILQQKLNYLCEDMKSSLQYLDIFPS 490

Query: 137 YLCHDLENRIKPRYRFHKWLKDQGFCEKEYAISTIIASSEKTFIA 3
           +LC +LENRIKPR+RFH WL ++GFC++EY+I++I+A+S+K+F+A
Sbjct: 491 FLCFNLENRIKPRHRFHMWLTERGFCKQEYSIASIVATSDKSFVA 535


Top