BLASTX nr result

ID: Scutellaria24_contig00030118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030118
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   155   4e-36
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   155   4e-36
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   152   3e-35
ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2...   152   4e-35

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/114 (69%), Positives = 92/114 (80%)
 Frame = +1

Query: 1   RQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPITIMNFLVPTRSYDVNVTPDKRKVFFS 180
           RQFFFVNGRPVDMPK+GKLVNELY+GANSRQYPI IMNF VPTR+YDVNVTPDKRK+FFS
Sbjct: 267 RQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFS 326

Query: 181 DENSILQSLREALEKIYSSNEASFSVNQVCELSDGKHASNVHSLHERSQFLSDS 342
           DE SIL SLRE LEKIYS +  S+SVN+  E ++    S ++    ++Q LS S
Sbjct: 327 DEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNP--PQTQILSSS 378


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/114 (69%), Positives = 92/114 (80%)
 Frame = +1

Query: 1   RQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPITIMNFLVPTRSYDVNVTPDKRKVFFS 180
           RQFFFVNGRPVDMPK+GKLVNELY+GANSRQYPI IMNF VPTR+YDVNVTPDKRK+FFS
Sbjct: 267 RQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFS 326

Query: 181 DENSILQSLREALEKIYSSNEASFSVNQVCELSDGKHASNVHSLHERSQFLSDS 342
           DE SIL SLRE LEKIYS +  S+SVN+  E ++    S ++    ++Q LS S
Sbjct: 327 DEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNP--PQTQILSSS 378


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  155 bits (391), Expect = 4e-36
 Identities = 85/158 (53%), Positives = 103/158 (65%), Gaps = 6/158 (3%)
 Frame = +1

Query: 1    RQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPITIMNFLVPTRSYDVNVTPDKRKVFFS 180
            RQFFFVNGRPVDMPK+GKLVNELY+GANSRQYPI IMNF VPTR+YDVNVTPDKRK+FFS
Sbjct: 2966 RQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFS 3025

Query: 181  DENSILQSLREALEKIYSSNEASFSVNQVCELSDGKHASNVHS-----LHERSQFLSD-S 342
            DE SIL SLRE LEKIYS +  S+SVN+  E ++    S ++      L    Q   D S
Sbjct: 3026 DEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETBNSELNPPQTQILXSSKQLFPDGS 3085

Query: 343  SLEPKETDDKLCANGSSNLKTALDSVRDSSSEKMREHS 456
             L+ +   ++         K    S  +  + K  +HS
Sbjct: 3086 DLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHS 3123


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  152 bits (384), Expect = 3e-35
 Identities = 82/145 (56%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1   RQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPITIMNFLVPTRSYDVNVTPDKRKVFFS 180
           RQ++FVNGRPVDMPK+ KLVNELYRGANSRQYPI IMNF+VPTR+ DVNVTPDKRK+FFS
Sbjct: 264 RQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMNFIVPTRACDVNVTPDKRKIFFS 323

Query: 181 DENSILQSLREALEKIYSSNEASFSVNQVCELSDGKHASNVHSLHERSQFLSDS-SLEPK 357
           DE SIL +LRE L+ IYS + AS+SVN+  E       S   S HE+S  LS   S    
Sbjct: 324 DETSILHALREGLQNIYSPSNASYSVNKFEERIKAASNSQSCSPHEKSLVLSKQLSAVSN 383

Query: 358 ETDDKLCANGSSNLKTALDSVRDSS 432
           + ++ L    +S+    L +V+  S
Sbjct: 384 DAEEILVEEHTSDGSNLLQTVKMKS 408


>ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 944

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/157 (49%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +1

Query: 1   RQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPITIMNFLVPTRSYDVNVTPDKRKVFFS 180
           RQ+FFVNGRPVDMPK+ K+VNELYRGANS+QYPI I+NF VPTR+YDVNVTPDKRK+FFS
Sbjct: 263 RQYFFVNGRPVDMPKVSKVVNELYRGANSKQYPIVILNFTVPTRTYDVNVTPDKRKIFFS 322

Query: 181 DENSILQSLREALEKIYSSNEASFSVNQVCELSDGKHASNVHSLHERS----QFLSDSSL 348
           +EN++LQ+LRE L++IYS++   +SVN+V   ++ +    + S H +S    + LS +  
Sbjct: 323 EENALLQALREGLQQIYSASNVCYSVNEVVLPAEKEACVELCSSHGKSPIVMKLLSPNGS 382

Query: 349 EPKETDDKLCANGSSNLKTALDSVRDSSSEKMREHSE 459
            P++       NGS +L   +++  ++ +    EH E
Sbjct: 383 RPQKEQCSESNNGSISL-DEINAECNNDTISQDEHEE 418


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