BLASTX nr result

ID: Scutellaria24_contig00030114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030114
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514012.1| WD and tetratricopeptide repeat protein, put...   153   2e-35
ref|NP_001190286.1| WD and tetratricopeptide repeats protein 1 [...   147   1e-33
ref|NP_568242.1| WD and tetratricopeptide repeats protein 1 [Ara...   147   1e-33
emb|CBI19235.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_002306549.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>ref|XP_002514012.1| WD and tetratricopeptide repeat protein, putative [Ricinus
           communis] gi|223547098|gb|EEF48595.1| WD and
           tetratricopeptide repeat protein, putative [Ricinus
           communis]
          Length = 761

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/111 (63%), Positives = 83/111 (74%)
 Frame = -2

Query: 333 FHDGNITDLINNRTLHTHHDFNHAAQMHXXXXXXXXXXXXXEGHRGCVNAISWNSEGSML 154
           FHDGNI + +  R   +  D NH+ QMH             EGH+GCVN+I+WNS GS+L
Sbjct: 6   FHDGNIYNFLETRYFDSRRDINHSLQMHSSLIRRLSQERELEGHQGCVNSIAWNSTGSLL 65

Query: 153 ISGSDDTQVNIWSYPSRKLMHSIDTGHSANIFCTKFIPETSDELIVSGAAD 1
           +SGSDDT++NIWSY  RKL+HSIDTGHSANIFCTKFIPETSDEL+VSGA D
Sbjct: 66  VSGSDDTRMNIWSYSGRKLLHSIDTGHSANIFCTKFIPETSDELVVSGAGD 116


>ref|NP_001190286.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana]
           gi|8979728|emb|CAB96849.1| putative protein [Arabidopsis
           thaliana] gi|332004229|gb|AED91612.1| WD and
           tetratricopeptide repeats protein 1 [Arabidopsis
           thaliana]
          Length = 754

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/114 (57%), Positives = 85/114 (74%)
 Frame = -2

Query: 342 SICFHDGNITDLINNRTLHTHHDFNHAAQMHXXXXXXXXXXXXXEGHRGCVNAISWNSEG 163
           ++ FHDGNI +L++ R+    H+ +   Q H             EGH+GCVNA++WNS G
Sbjct: 3   NLSFHDGNIFNLLHTRSQDPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNG 62

Query: 162 SMLISGSDDTQVNIWSYPSRKLMHSIDTGHSANIFCTKFIPETSDELIVSGAAD 1
           S+LISGSDD ++NIW+Y SRKL+HSIDTGH+ANIFCTKF+PETSDEL+VSGA D
Sbjct: 63  SLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGD 116


>ref|NP_568242.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana]
           gi|14532680|gb|AAK64141.1| unknown protein [Arabidopsis
           thaliana] gi|23297429|gb|AAN12885.1| unknown protein
           [Arabidopsis thaliana] gi|332004228|gb|AED91611.1| WD
           and tetratricopeptide repeats protein 1 [Arabidopsis
           thaliana]
          Length = 757

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/114 (57%), Positives = 85/114 (74%)
 Frame = -2

Query: 342 SICFHDGNITDLINNRTLHTHHDFNHAAQMHXXXXXXXXXXXXXEGHRGCVNAISWNSEG 163
           ++ FHDGNI +L++ R+    H+ +   Q H             EGH+GCVNA++WNS G
Sbjct: 3   NLSFHDGNIFNLLHTRSQDPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNG 62

Query: 162 SMLISGSDDTQVNIWSYPSRKLMHSIDTGHSANIFCTKFIPETSDELIVSGAAD 1
           S+LISGSDD ++NIW+Y SRKL+HSIDTGH+ANIFCTKF+PETSDEL+VSGA D
Sbjct: 63  SLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGD 116


>emb|CBI19235.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  146 bits (369), Expect = 1e-33
 Identities = 64/111 (57%), Positives = 82/111 (73%)
 Frame = -2

Query: 333 FHDGNITDLINNRTLHTHHDFNHAAQMHXXXXXXXXXXXXXEGHRGCVNAISWNSEGSML 154
           FHD N+ + ++ R++   HD + + QMH             EGH+GCVN ++WNS GS+L
Sbjct: 6   FHDSNLYNFVDGRSIDFRHDVSRSLQMHSSLLRRLTQEGELEGHQGCVNTVAWNSRGSLL 65

Query: 153 ISGSDDTQVNIWSYPSRKLMHSIDTGHSANIFCTKFIPETSDELIVSGAAD 1
           ISGSDDT++NIW+YPSRKL+H I+TGHSANIFC KFIPETSDEL+ SGA D
Sbjct: 66  ISGSDDTRINIWNYPSRKLLHCIETGHSANIFCAKFIPETSDELVASGAGD 116


>ref|XP_002306549.1| predicted protein [Populus trichocarpa] gi|222855998|gb|EEE93545.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/111 (61%), Positives = 85/111 (76%)
 Frame = -2

Query: 333 FHDGNITDLINNRTLHTHHDFNHAAQMHXXXXXXXXXXXXXEGHRGCVNAISWNSEGSML 154
           FHDGNI +++ +R      D NH+ QMH             EGH+GCVN+I+WNS+GS+L
Sbjct: 6   FHDGNICNMLESRH---RPDVNHSLQMHSSLIRRLSQERELEGHQGCVNSIAWNSKGSLL 62

Query: 153 ISGSDDTQVNIWSYPSRKLMHSIDTGHSANIFCTKFIPETSDELIVSGAAD 1
           ISGSDDT++NIW+Y  RKL+HSIDTGHSANIFCTKF+PETSDEL+V+GA D
Sbjct: 63  ISGSDDTRMNIWNYAGRKLLHSIDTGHSANIFCTKFVPETSDELVVAGAGD 113


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