BLASTX nr result

ID: Scutellaria24_contig00030095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030095
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34673.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_004159949.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...    60   1e-07
ref|XP_004143909.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...    60   1e-07
gb|AAD10493.1| beta-tubulin 6, partial [Triticum aestivum]             60   1e-07
ref|NP_001167653.1| uncharacterized protein LOC100381283 [Zea ma...    60   1e-07

>emb|CBI34673.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/83 (44%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
 Frame = +3

Query: 3   NADECMVLDNEALYDICFRTLKLTNPS--------CNPSFLITCIHPFLASL--DILTHT 152
           NADECMVLDNEALYDICFRTLKLTNPS              +TC   F   L  D+    
Sbjct: 159 NADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLA 218

Query: 153 SSA*YIPRLRFYEAFQQTVGLLC 221
            +    PRL F+        ++C
Sbjct: 219 VNLIPFPRLHFFMQMWDAKNMMC 241


>ref|XP_004159949.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 445

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 3   NADECMVLDNEALYDICFRTLKLTNPS 83
           NADECMVLDNEALYDICFRTLKLTNPS
Sbjct: 195 NADECMVLDNEALYDICFRTLKLTNPS 221


>ref|XP_004143909.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 432

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 3   NADECMVLDNEALYDICFRTLKLTNPS 83
           NADECMVLDNEALYDICFRTLKLTNPS
Sbjct: 186 NADECMVLDNEALYDICFRTLKLTNPS 212


>gb|AAD10493.1| beta-tubulin 6, partial [Triticum aestivum]
          Length = 441

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 3   NADECMVLDNEALYDICFRTLKLTNPS 83
           NADECMVLDNEALYDICFRTLKLTNPS
Sbjct: 191 NADECMVLDNEALYDICFRTLKLTNPS 217


>ref|NP_001167653.1| uncharacterized protein LOC100381283 [Zea mays]
           gi|416145|gb|AAA19707.1| beta-4 tubulin [Zea mays]
           gi|194689110|gb|ACF78639.1| unknown [Zea mays]
           gi|194708284|gb|ACF88226.1| unknown [Zea mays]
           gi|413933508|gb|AFW68059.1| beta tubulin4 isoform 1 [Zea
           mays] gi|413933509|gb|AFW68060.1| beta tubulin4 isoform
           2 [Zea mays]
          Length = 447

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 3   NADECMVLDNEALYDICFRTLKLTNPS 83
           NADECMVLDNEALYDICFRTLKLTNPS
Sbjct: 197 NADECMVLDNEALYDICFRTLKLTNPS 223


Top