BLASTX nr result

ID: Scutellaria24_contig00030029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030029
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25461.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002871168.1| hypothetical protein ARALYDRAFT_487351 [Arab...   111   5e-23
ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidops...   110   9e-23
ref|XP_003616660.1| Anaphase-promoting complex subunit [Medicago...   107   1e-21

>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/77 (76%), Positives = 68/77 (88%)
 Frame = -2

Query: 231  RNLILLNRIRSS*DWIKSQIPEVIKNGVEGLGSEMNDIYEMDAEAFVQAYVNIVVGACIS 52
            RNLI+ +R+  S DWI+SQIPE+IKNGV+GLG E+ D  EMDAEAFVQAYVNIV GACIS
Sbjct: 1358 RNLIMWSRVHPSKDWIQSQIPEIIKNGVKGLGDEIGDTDEMDAEAFVQAYVNIVAGACIS 1417

Query: 51   LGLRFAGTRDGNAQELL 1
            LGLRFAGT++GNAQELL
Sbjct: 1418 LGLRFAGTKNGNAQELL 1434


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
            predicted protein [Populus trichocarpa]
          Length = 1929

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/77 (71%), Positives = 65/77 (84%)
 Frame = -2

Query: 231  RNLILLNRIRSS*DWIKSQIPEVIKNGVEGLGSEMNDIYEMDAEAFVQAYVNIVVGACIS 52
            RNLI+ +R+  S DWI+SQIP ++K+GV GL   +ND+ EMDAE FVQAYVNIV GACIS
Sbjct: 1273 RNLIMWSRVHPSNDWIQSQIPNIVKSGVNGLEDHVNDMDEMDAETFVQAYVNIVAGACIS 1332

Query: 51   LGLRFAGTRDGNAQELL 1
            LGLRFAGT+DGNAQELL
Sbjct: 1333 LGLRFAGTKDGNAQELL 1349


>ref|XP_002871168.1| hypothetical protein ARALYDRAFT_487351 [Arabidopsis lyrata subsp.
            lyrata] gi|297317005|gb|EFH47427.1| hypothetical protein
            ARALYDRAFT_487351 [Arabidopsis lyrata subsp. lyrata]
          Length = 1748

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/77 (67%), Positives = 66/77 (85%)
 Frame = -2

Query: 231  RNLILLNRIRSS*DWIKSQIPEVIKNGVEGLGSEMNDIYEMDAEAFVQAYVNIVVGACIS 52
            RNLI+ +RI  + DWI+SQ+PEV++NG+  L  +M+D+YE+D EA VQAYVNIV GACIS
Sbjct: 1204 RNLIMWSRICPTCDWIQSQVPEVVRNGISHLRDDMDDMYEVDVEALVQAYVNIVAGACIS 1263

Query: 51   LGLRFAGTRDGNAQELL 1
            LGLRFAGTRDGNA++LL
Sbjct: 1264 LGLRFAGTRDGNARDLL 1280


>ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidopsis thaliana]
            gi|75170223|sp|Q9FFF9.1|APC1_ARATH RecName:
            Full=Anaphase-promoting complex subunit 1; AltName:
            Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO
            DEFECTIVE 2771 gi|10178133|dbj|BAB11545.1| meiotic check
            point regulator-like protein [Arabidopsis thaliana]
            gi|332003506|gb|AED90889.1| anaphase-promoting complex
            subunit 1 [Arabidopsis thaliana]
          Length = 1678

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/77 (67%), Positives = 66/77 (85%)
 Frame = -2

Query: 231  RNLILLNRIRSS*DWIKSQIPEVIKNGVEGLGSEMNDIYEMDAEAFVQAYVNIVVGACIS 52
            RNLI+ +RI  + DWI+SQ+PEV+KNG+  L  +M+++YE+D EA VQAYVNIV GACIS
Sbjct: 1201 RNLIMWSRICPTCDWIQSQVPEVVKNGISQLRDDMDNMYEVDVEALVQAYVNIVAGACIS 1260

Query: 51   LGLRFAGTRDGNAQELL 1
            LGLRFAGTRDGNA++LL
Sbjct: 1261 LGLRFAGTRDGNARDLL 1277


>ref|XP_003616660.1| Anaphase-promoting complex subunit [Medicago truncatula]
            gi|355517995|gb|AES99618.1| Anaphase-promoting complex
            subunit [Medicago truncatula]
          Length = 1854

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/77 (66%), Positives = 64/77 (83%)
 Frame = -2

Query: 231  RNLILLNRIRSS*DWIKSQIPEVIKNGVEGLGSEMNDIYEMDAEAFVQAYVNIVVGACIS 52
            RNLI+ + +  S DW+ SQIPE+++ GVEGLG + NDI +MD +A++QAYVNIV GACIS
Sbjct: 1280 RNLIMWSSVHPSKDWVWSQIPEIVRCGVEGLGGDDNDIDDMDGDAYMQAYVNIVAGACIS 1339

Query: 51   LGLRFAGTRDGNAQELL 1
            LGL FAGTR+GNAQELL
Sbjct: 1340 LGLVFAGTRNGNAQELL 1356


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