BLASTX nr result

ID: Scutellaria24_contig00030022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030022
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI58371.1| pentatricopeptide repeat-containing protein [Caps...   120   1e-25
ref|XP_002889073.1| pentatricopeptide repeat-containing protein ...   118   4e-25
ref|NP_177755.3| pentatricopeptide repeat-containing protein [Ar...   117   7e-25
ref|NP_001185409.1| pentatricopeptide repeat-containing protein ...   117   7e-25
ref|NP_001031285.4| pentatricopeptide repeat-containing protein ...   117   7e-25

>gb|ADI58371.1| pentatricopeptide repeat-containing protein [Capsicum annuum]
          Length = 805

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/78 (71%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   EALDQPERGVRVLAKMKYLNLMPDIRTFELLFALFGNVNAPYEDGNMLSQADVAKRINAI 180
           + LD+PER V++ AKMK LNL P+IRT+ELLF+LFGNVNAPYE+GNMLSQ DVAKRINAI
Sbjct: 442 DVLDRPERAVQIFAKMKKLNLQPNIRTYELLFSLFGNVNAPYEEGNMLSQVDVAKRINAI 501

Query: 181 EMDMRKHGIQHSRVSIQN 234
           EMDM  +G+QHS +S++N
Sbjct: 502 EMDMMINGLQHSHLSLKN 519


>ref|XP_002889073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334914|gb|EFH65332.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 800

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = +1

Query: 1   EALDQPERGVRVLAKMKYLNLMPDIRTFELLFALFGNVNAPYEDGNMLSQADVAKRINAI 180
           ++LDQPER VRVLA+MK L L PD+RT+ELLF+LFGNVNAPYE+GNMLSQ D  KRINAI
Sbjct: 441 DSLDQPERAVRVLARMKQLKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAI 500

Query: 181 EMDMRKHGIQHSRVSIQNLV 240
           EMDM ++G QHS +S +N++
Sbjct: 501 EMDMVRNGFQHSPISRRNVL 520


>ref|NP_177755.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806405|sp|Q9SGQ6.2|PP126_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g76280 gi|332197697|gb|AEE35818.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 773

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = +1

Query: 1   EALDQPERGVRVLAKMKYLNLMPDIRTFELLFALFGNVNAPYEDGNMLSQADVAKRINAI 180
           ++LDQPER VRVLA+MK L L PD+RT+ELLF+LFGNVNAPYE+GNMLSQ D  KRINAI
Sbjct: 414 DSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAI 473

Query: 181 EMDMRKHGIQHSRVSIQNLV 240
           EMDM ++G QHS +S  N++
Sbjct: 474 EMDMMRNGFQHSPISRLNVL 493


>ref|NP_001185409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332197699|gb|AEE35820.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 801

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = +1

Query: 1   EALDQPERGVRVLAKMKYLNLMPDIRTFELLFALFGNVNAPYEDGNMLSQADVAKRINAI 180
           ++LDQPER VRVLA+MK L L PD+RT+ELLF+LFGNVNAPYE+GNMLSQ D  KRINAI
Sbjct: 442 DSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAI 501

Query: 181 EMDMRKHGIQHSRVSIQNLV 240
           EMDM ++G QHS +S  N++
Sbjct: 502 EMDMMRNGFQHSPISRLNVL 521


>ref|NP_001031285.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332197698|gb|AEE35819.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = +1

Query: 1   EALDQPERGVRVLAKMKYLNLMPDIRTFELLFALFGNVNAPYEDGNMLSQADVAKRINAI 180
           ++LDQPER VRVLA+MK L L PD+RT+ELLF+LFGNVNAPYE+GNMLSQ D  KRINAI
Sbjct: 446 DSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAI 505

Query: 181 EMDMRKHGIQHSRVSIQNLV 240
           EMDM ++G QHS +S  N++
Sbjct: 506 EMDMMRNGFQHSPISRLNVL 525


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