BLASTX nr result

ID: Scutellaria24_contig00030004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030004
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   170   1e-40
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
emb|CBI30094.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34

>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/141 (54%), Positives = 103/141 (73%)
 Frame = -3

Query: 530 RAGRVEEAFDLIKRQPTKASVNTWCTLLLGCNIQGNDDIGKQVEDELLDMETANAGTYAL 351
           RAGR++EAFD IK    K S + W  LL GCN+ G+ D+GK   ++LL+ E  NAGTY +
Sbjct: 502 RAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLV 561

Query: 350 LLNLYAARGKTREAATVKLKMKEEGMKKQPGCSWIEIGSKFHVFIAGDKSRNEFEGMHCF 171
           L N+YA+ GK REAA V++KMK++G+KKQPGCSWIE+G+  HVF+ GD S  EFE ++  
Sbjct: 562 LSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLL 621

Query: 170 LYDLHNKMKKIGNNFHNILTM 108
           L+DLH KMKKIG+  +  LT+
Sbjct: 622 LHDLHTKMKKIGHTLYEDLTI 642


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/141 (54%), Positives = 103/141 (73%)
 Frame = -3

Query: 530 RAGRVEEAFDLIKRQPTKASVNTWCTLLLGCNIQGNDDIGKQVEDELLDMETANAGTYAL 351
           RAGR++EAFD IK    K S + W  LL GCN+ G+ D+GK   ++LL+ E  NAGTY +
Sbjct: 502 RAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLV 561

Query: 350 LLNLYAARGKTREAATVKLKMKEEGMKKQPGCSWIEIGSKFHVFIAGDKSRNEFEGMHCF 171
           L N+YA+ GK REAA V++KMK++G+KKQPGCSWIE+G+  HVF+ GD S  EFE ++  
Sbjct: 562 LSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLL 621

Query: 170 LYDLHNKMKKIGNNFHNILTM 108
           L+DLH KMKKIG+  +  LT+
Sbjct: 622 LHDLHTKMKKIGHTLYEDLTI 642


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/137 (55%), Positives = 100/137 (72%)
 Frame = -3

Query: 530 RAGRVEEAFDLIKRQPTKASVNTWCTLLLGCNIQGNDDIGKQVEDELLDMETANAGTYAL 351
           RAGR++EAF  I+R  TK S   W  LL GCN+  N  IGKQ   +LL++E  NAGTY L
Sbjct: 467 RAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLL 526

Query: 350 LLNLYAARGKTREAATVKLKMKEEGMKKQPGCSWIEIGSKFHVFIAGDKSRNEFEGMHCF 171
           L N+YA+ GK REAA V+LKMK++G+KKQPGCSWIE+G++ HVF+ GDKS ++ + ++  
Sbjct: 527 LSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSL 586

Query: 170 LYDLHNKMKKIGNNFHN 120
           L DLH+KMKK G   +N
Sbjct: 587 LRDLHSKMKKAGYEPNN 603


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/137 (55%), Positives = 100/137 (72%)
 Frame = -3

Query: 530 RAGRVEEAFDLIKRQPTKASVNTWCTLLLGCNIQGNDDIGKQVEDELLDMETANAGTYAL 351
           RAGR++EAF  I+R  TK S   W  LL GCN+  N  IGKQ   +LL++E  NAGTY L
Sbjct: 488 RAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLL 547

Query: 350 LLNLYAARGKTREAATVKLKMKEEGMKKQPGCSWIEIGSKFHVFIAGDKSRNEFEGMHCF 171
           L N+YA+ GK REAA V+LKMK++G+KKQPGCSWIE+G++ HVF+ GDKS ++ + ++  
Sbjct: 548 LSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSL 607

Query: 170 LYDLHNKMKKIGNNFHN 120
           L DLH+KMKK G   +N
Sbjct: 608 LRDLHSKMKKAGYEPNN 624


>ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Glycine max]
          Length = 581

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/133 (50%), Positives = 97/133 (72%)
 Frame = -3

Query: 530 RAGRVEEAFDLIKRQPTKASVNTWCTLLLGCNIQGNDDIGKQVEDELLDMETANAGTYAL 351
           RAGR++EA ++I+    +  +  W  LL GCN+ GN DIGK V +++L +E  NAGTY+L
Sbjct: 437 RAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSL 496

Query: 350 LLNLYAARGKTREAATVKLKMKEEGMKKQPGCSWIEIGSKFHVFIAGDKSRNEFEGMHCF 171
           L N+YA+ GK +EAA V+++MK+ G+KKQPGCSWIE+G+   VF+ GDK  +++E +   
Sbjct: 497 LSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHL 556

Query: 170 LYDLHNKMKKIGN 132
           L+DLH KMKK G+
Sbjct: 557 LHDLHTKMKKAGD 569


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