BLASTX nr result

ID: Scutellaria24_contig00029970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029970
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   119   2e-25
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ...   112   2e-23

>ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
           gi|449529850|ref|XP_004171911.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
          Length = 580

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/97 (59%), Positives = 76/97 (78%)
 Frame = +1

Query: 1   QHRQFRDSLSLYSESHRLGLLPNTFAVSSALKACARILCKMGGLMIHGSVQKLGFCKVVF 180
           Q+ QF ++++ Y +  RLGL P+TFAVSS L+AC RI+CK  G  IH  V KLGFC+ V+
Sbjct: 81  QNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIHAQVYKLGFCRCVY 140

Query: 181 VQTSLLDFYSKMGDLVVARKVFDEITGKNVVSWNCLL 291
           VQT+L+DFYSK+GD+  A+KVFDE+T KNVVSWN +L
Sbjct: 141 VQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSIL 177


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = +1

Query: 1   QHRQFRDSLSLYSESHRLGLLPNTFAVSSALKACARILCKMGGLMIHGSVQKLGFC---K 171
           QH QF+++ +LY +  R GL P TFA+SSALKACARI  +MGGL IHG VQK GF     
Sbjct: 82  QHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFSGGGD 141

Query: 172 VVFVQTSLLDFYSKMGDLVVARKVFDEITGKNVVSWNCLL 291
            ++V+T+L+DFY K+GD+ +ARK+FDE+  +NVVSWN +L
Sbjct: 142 GIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSML 181


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = +1

Query: 1   QHRQFRDSLSLYSESHRLGLLPNTFAVSSALKACARILCKMGGLMIHGSVQKLGFC---K 171
           QH QF+++ +LY +  R GL P TFA+SSALKACARI  +MGGL IHG VQK GF     
Sbjct: 78  QHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFSGGGD 137

Query: 172 VVFVQTSLLDFYSKMGDLVVARKVFDEITGKNVVSWNCLL 291
            ++V+T+L+DFY K+GD+ +ARK+FDE+  +NVVSWN +L
Sbjct: 138 GIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSML 177


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/100 (56%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = +1

Query: 1   QHRQFRDSLSLYSESHRLGLLPNTFAVSSALKACARILCKMGGLMIHGSVQKLGFC---K 171
           QH QF+++ +LY +  R GL P TFA+SSALKACARI  +MGG+ IHG VQK GF     
Sbjct: 82  QHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQVQKFGFSCGGD 141

Query: 172 VVFVQTSLLDFYSKMGDLVVARKVFDEITGKNVVSWNCLL 291
            ++V+T+L+DFY K+GD+ +ARK+FDE+  +NVVSWN +L
Sbjct: 142 GIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSML 181


>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510664|gb|AES91806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/97 (57%), Positives = 72/97 (74%)
 Frame = +1

Query: 1   QHRQFRDSLSLYSESHRLGLLPNTFAVSSALKACARILCKMGGLMIHGSVQKLGFCKVVF 180
           Q  QF +++SLY +  R+GL P++ AVSS LK+CAR+   + GL+IHG V K GF   V+
Sbjct: 81  QKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVY 140

Query: 181 VQTSLLDFYSKMGDLVVARKVFDEITGKNVVSWNCLL 291
           VQT+LLD Y K+GD+V ARKVFDE+  KNVVSWN LL
Sbjct: 141 VQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLL 177


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