BLASTX nr result

ID: Scutellaria24_contig00029925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029925
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|2...   118   7e-25
ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like...   117   2e-24
ref|NP_197262.1| RING-H2 finger protein ATL52 [Arabidopsis thali...   115   5e-24
ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...   114   1e-23

>ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|222840856|gb|EEE78403.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  118 bits (296), Expect = 7e-25
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 8/100 (8%)
 Frame = -3

Query: 612 EGLIEGTECSVCLTEFQENECLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRANVA----- 448
           +GLIEGT+CSVCL+EF+E+E +RLLPKCSHAFH+PCIDTWL+SHSNCPLCRAN+      
Sbjct: 136 DGLIEGTDCSVCLSEFEEDESIRLLPKCSHAFHVPCIDTWLRSHSNCPLCRANIVFFSAS 195

Query: 447 --ALPPSQSSSHVGVHS-YEAQRPNDLVLVVHDRALDCRD 337
              LPP  + +  G  S  E+QR N+ V V  D     RD
Sbjct: 196 LPQLPPPVTETPQGNESLQESQRANENVSVTQDTERVARD 235


>ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 382

 Score =  117 bits (293), Expect = 2e-24
 Identities = 82/245 (33%), Positives = 115/245 (46%), Gaps = 62/245 (25%)
 Frame = -3

Query: 612 EGLIEGTECSVCLTEFQENECLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRANVA----- 448
           +GL+EGT+CSVCL+EFQENE LRLLPKCSHAFHLPCIDTWLKSHS CPLCR+N++     
Sbjct: 136 DGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPTNLF 195

Query: 447 ALPPS--QSSSHVGVHSYEAQ---RPNDLVLVVHDRALD--------------------- 346
           + P    Q++ H    +++ Q   R ND ++VV  + LD                     
Sbjct: 196 STPTQEIQTTQHFVSSAFQYQHQHRTNDTIVVVVVQDLDDLTVVRQETVDSRLENDDASS 255

Query: 345 ------CRDHVVVNXXXXXXXDMRTKSD---QECVXXXXXXXXXXXXXXXRNLLISDVLK 193
                 C     ++        +R + D      V                 + ++D+L+
Sbjct: 256 KNQREGCAAESQISGARERMNQVRQEYDVVVDGVVEPFRRSVSLNSLSWQGQVSVADILR 315

Query: 192 IEEMEKGESLRD------IGSSK----------------GLAMKRCNSTGKFMFLDHDKG 79
           + +  + E+  D      IGSSK                 L M R  STGK  F ++ KG
Sbjct: 316 VSQDSEEEAEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNRSISTGKLGFTNYGKG 375

Query: 78  KNVLI 64
           K+ +I
Sbjct: 376 KSCII 380


>ref|NP_197262.1| RING-H2 finger protein ATL52 [Arabidopsis thaliana]
           gi|68565306|sp|Q9LF64.1|ATL52_ARATH RecName:
           Full=RING-H2 finger protein ATL52
           gi|9755785|emb|CAC01904.1| RING-H2 zinc finger
           protein-like [Arabidopsis thaliana]
           gi|332005064|gb|AED92447.1| RING-H2 finger protein ATL52
           [Arabidopsis thaliana]
          Length = 362

 Score =  115 bits (289), Expect = 5e-24
 Identities = 78/233 (33%), Positives = 113/233 (48%), Gaps = 49/233 (21%)
 Frame = -3

Query: 612 EGLIEGTECSVCLTEFQENECLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRA-------- 457
           +G ++G++CSVCL+EF+ENE LRLLPKC+HAFHLPCIDTWLKSHSNCPLCRA        
Sbjct: 134 DGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNP 193

Query: 456 ------NVAALPPSQSSS----------HVGVHSYEAQRPN-DLVLVVHDRALDCRDHVV 328
                 NV+ +  +QS+S          ++ +  YE+Q  + D V+V+ D  +  R+   
Sbjct: 194 TASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDA 253

Query: 327 VNXXXXXXXDMRTKSDQECVXXXXXXXXXXXXXXXRNLLISDVLKIEEMEKGES------ 166
            +          TK +                     + I+DVL+  E E+GES      
Sbjct: 254 RSELQLPEERRETKDEDSLPIRRSVSLNSGVV-----VSIADVLREIEDEEGESGGVGTS 308

Query: 165 ----LRDIGSSKGLAMKRCN--------------STGKFMFLDHDKGKNVLIP 61
                 + G  K +     N              STG+F+F  +D+G+N  +P
Sbjct: 309 QRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTGRFIFSRYDRGRNYRLP 361


>ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|222857605|gb|EEE95152.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  115 bits (289), Expect = 5e-24
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 13/98 (13%)
 Frame = -3

Query: 612 EGLIEGTECSVCLTEFQENECLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRANVAAL--- 442
           +G +EGTECSVCL+EFQENE LRLLPKCSHAFHLPCIDTWLKSH++CPLCRAN+A     
Sbjct: 131 DGFVEGTECSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHASCPLCRANIAPANIL 190

Query: 441 ---------PPSQSSSHVGVHSYEAQR-PNDLVLVVHD 358
                    P  ++     V + + Q   ND VLV+ D
Sbjct: 191 PSEAPAVPEPVQENLPRTNVSTLQYQHGTNDAVLVIQD 228


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/109 (51%), Positives = 70/109 (64%), Gaps = 13/109 (11%)
 Frame = -3

Query: 612 EGLIEGTECSVCLTEFQENECLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRANVAALPPS 433
           +GL++ T+CSVCL EFQ++E +RLLPKCSHAFHLPCIDTWLKSHSNCPLCRA + A   S
Sbjct: 140 DGLVDVTDCSVCLNEFQDDESIRLLPKCSHAFHLPCIDTWLKSHSNCPLCRATIFAFNSS 199

Query: 432 QSSS-------------HVGVHSYEAQRPNDLVLVVHDRALDCRDHVVV 325
            SS+                  S E Q PN+++ V  D  LD  + V +
Sbjct: 200 NSSAATLHLPAPVIENPSTNEVSLETQHPNEVLDVERDNELDVVEEVPI 248


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