BLASTX nr result

ID: Scutellaria24_contig00029870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029870
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   200   1e-49
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...   199   2e-49
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   198   4e-49

>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = -2

Query: 373 EKPDHVTMIGVLCACSHAGLVEEGRYYFDAMSKEYGLKPLRDHFTCMVDLLGRAGRLIEA 194
           +KPDHVTMIGVL ACSHAGLVEEGR YF +M  E GL P++DHFTCMVDLLGRAG L EA
Sbjct: 488 QKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEA 547

Query: 193 RNLITSMPIPPDSVVWGSLLAACKVYRDIDLGNFVAEKLMEIDPENSGPYVLLSNLYAEL 14
            +LI +MP+ PD+VVWGSLLAACKV+ +I+LG +VAEKLMEIDP NSGPYVLLSN+YAEL
Sbjct: 548 NDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAEL 607

Query: 13  GRWR 2
           GRW+
Sbjct: 608 GRWK 611


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  199 bits (507), Expect = 2e-49
 Identities = 95/123 (77%), Positives = 111/123 (90%)
 Frame = -2

Query: 373 EKPDHVTMIGVLCACSHAGLVEEGRYYFDAMSKEYGLKPLRDHFTCMVDLLGRAGRLIEA 194
           EKPDHVTMIGVLCACSHAGLVEEGR+YF +M +E+GL PL+DH+TCMVDLLGRAG L EA
Sbjct: 454 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEA 512

Query: 193 RNLITSMPIPPDSVVWGSLLAACKVYRDIDLGNFVAEKLMEIDPENSGPYVLLSNLYAEL 14
           +NLI +MP+ PD+VVWGSLLAACKV+ +I++G   AEKL+EIDP NSGPYVLLSN+YAEL
Sbjct: 513 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAEL 572

Query: 13  GRW 5
           GRW
Sbjct: 573 GRW 575


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  199 bits (507), Expect = 2e-49
 Identities = 95/123 (77%), Positives = 111/123 (90%)
 Frame = -2

Query: 373 EKPDHVTMIGVLCACSHAGLVEEGRYYFDAMSKEYGLKPLRDHFTCMVDLLGRAGRLIEA 194
           EKPDHVTMIGVLCACSHAGLVEEGR+YF +M +E+GL PL+DH+TCMVDLLGRAG L EA
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEA 542

Query: 193 RNLITSMPIPPDSVVWGSLLAACKVYRDIDLGNFVAEKLMEIDPENSGPYVLLSNLYAEL 14
           +NLI +MP+ PD+VVWGSLLAACKV+ +I++G   AEKL+EIDP NSGPYVLLSN+YAEL
Sbjct: 543 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAEL 602

Query: 13  GRW 5
           GRW
Sbjct: 603 GRW 605


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score =  199 bits (507), Expect = 2e-49
 Identities = 88/123 (71%), Positives = 110/123 (89%)
 Frame = -2

Query: 373 EKPDHVTMIGVLCACSHAGLVEEGRYYFDAMSKEYGLKPLRDHFTCMVDLLGRAGRLIEA 194
           EKPDH+TMIGVL AC HAG VEEGR+YF +M++++G+ PLRDH+TCMVDLLGRAG L EA
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548

Query: 193 RNLITSMPIPPDSVVWGSLLAACKVYRDIDLGNFVAEKLMEIDPENSGPYVLLSNLYAEL 14
           +++I  MP+ PDSV+WGSLLAACKV+R+I LG +VAEKL+E++P NSGPYVLLSN+YAEL
Sbjct: 549 KSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAEL 608

Query: 13  GRW 5
           G+W
Sbjct: 609 GKW 611


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/124 (75%), Positives = 110/124 (88%)
 Frame = -2

Query: 373 EKPDHVTMIGVLCACSHAGLVEEGRYYFDAMSKEYGLKPLRDHFTCMVDLLGRAGRLIEA 194
           E+PDHVTMIGVL ACSHAGLVEEGR YF +M+ E+GL P++DH+TCMVDLLGRAG L EA
Sbjct: 488 ERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEA 547

Query: 193 RNLITSMPIPPDSVVWGSLLAACKVYRDIDLGNFVAEKLMEIDPENSGPYVLLSNLYAEL 14
            NLI +MP+ PD+VVWGSLLAACKV+ +I LG +VAE+L+EIDP NSGPYVLLSN+YAEL
Sbjct: 548 NNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAEL 607

Query: 13  GRWR 2
           GRW+
Sbjct: 608 GRWK 611


Top