BLASTX nr result

ID: Scutellaria24_contig00029832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029832
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28908.3| unnamed protein product [Vitis vinifera]              239   1e-61
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...   236   1e-60
ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...   231   5e-59
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]           231   5e-59

>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/137 (85%), Positives = 127/137 (92%)
 Frame = -1

Query: 423 NEEALRLWDLMIDKGITPTAASFRTLSTGLCLSGKVARACKILDELAPMGVVLETAFEDM 244
           NEEAL+LWDLMIDKGITPT ASFR LS GLCLSGKVARACKILDELAPMGV+ ETAFEDM
Sbjct: 521 NEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDM 580

Query: 243 INVLCKAGRIVEACKLADGVIDRGREIPGKVRTIMINALRKAGKADLAMKLMHSKIAIGY 64
           INVLCKAGR  +ACKLADG++DRGRE+PG+VRTI+INALRKAG ADLAMKLMHSKI IGY
Sbjct: 581 INVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGY 640

Query: 63  DRMRSVKKRVKFRNLVD 13
           DRM S+K+RVKFR LVD
Sbjct: 641 DRMGSIKRRVKFRVLVD 657


>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score =  236 bits (602), Expect = 1e-60
 Identities = 115/137 (83%), Positives = 128/137 (93%)
 Frame = -1

Query: 423 NEEALRLWDLMIDKGITPTAASFRTLSTGLCLSGKVARACKILDELAPMGVVLETAFEDM 244
           NEEAL LWDLMIDKGITPTAA+FR LSTGLCLSGKVARACKILDE+APMGV+ ETAF+DM
Sbjct: 510 NEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDM 569

Query: 243 INVLCKAGRIVEACKLADGVIDRGREIPGKVRTIMINALRKAGKADLAMKLMHSKIAIGY 64
           IN+LCKAGRI EACKLADG++DRGREIPG+VRT++INALRKAG ADLA+KLM SKI IGY
Sbjct: 570 INILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGY 629

Query: 63  DRMRSVKKRVKFRNLVD 13
           DRM SVK+RVKFR LV+
Sbjct: 630 DRMGSVKRRVKFRILVE 646


>ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  236 bits (601), Expect = 2e-60
 Identities = 114/137 (83%), Positives = 128/137 (93%)
 Frame = -1

Query: 423 NEEALRLWDLMIDKGITPTAASFRTLSTGLCLSGKVARACKILDELAPMGVVLETAFEDM 244
           NEEAL++WD+MIDKGITPTAA+FR LS GLCLSGKVARACK+LDELAPMGV+ ETAFEDM
Sbjct: 463 NEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDM 522

Query: 243 INVLCKAGRIVEACKLADGVIDRGREIPGKVRTIMINALRKAGKADLAMKLMHSKIAIGY 64
           +NVLCKAGRI EACKLADG +DRGREIPG+VRT++INALRKAG ADLA+KLMHSKI IGY
Sbjct: 523 LNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGY 582

Query: 63  DRMRSVKKRVKFRNLVD 13
           DRM SVK+RVKFR LV+
Sbjct: 583 DRMGSVKRRVKFRILVE 599


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score =  231 bits (589), Expect = 5e-59
 Identities = 111/137 (81%), Positives = 125/137 (91%)
 Frame = -1

Query: 423 NEEALRLWDLMIDKGITPTAASFRTLSTGLCLSGKVARACKILDELAPMGVVLETAFEDM 244
           NEEAL+LWD+MIDKGITPTAA FR LSTGLCLSGKVARACKILDELAPMGV+L+ A EDM
Sbjct: 519 NEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDM 578

Query: 243 INVLCKAGRIVEACKLADGVIDRGREIPGKVRTIMINALRKAGKADLAMKLMHSKIAIGY 64
           IN LCKAGRI EACKLADG+ +RGRE+PG++RT+MINALRK GKADLAMKLMHSKI IGY
Sbjct: 579 INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638

Query: 63  DRMRSVKKRVKFRNLVD 13
           +RM SVK+RVKF  L++
Sbjct: 639 ERMGSVKRRVKFTTLLE 655


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  231 bits (589), Expect = 5e-59
 Identities = 111/137 (81%), Positives = 125/137 (91%)
 Frame = -1

Query: 423 NEEALRLWDLMIDKGITPTAASFRTLSTGLCLSGKVARACKILDELAPMGVVLETAFEDM 244
           NEEAL+LWD+MIDKGITPTAA FR LSTGLCLSGKVARACKILDELAPMGV+L+ A EDM
Sbjct: 501 NEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDM 560

Query: 243 INVLCKAGRIVEACKLADGVIDRGREIPGKVRTIMINALRKAGKADLAMKLMHSKIAIGY 64
           IN LCKAGRI EACKLADG+ +RGRE+PG++RT+MINALRK GKADLAMKLMHSKI IGY
Sbjct: 561 INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 620

Query: 63  DRMRSVKKRVKFRNLVD 13
           +RM SVK+RVKF  L++
Sbjct: 621 ERMGSVKRRVKFTTLLE 637


Top