BLASTX nr result

ID: Scutellaria24_contig00029778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029778
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Go...    74   2e-11
gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Cocco...    72   5e-11
gb|AAX48878.1| S3 [Suberites domuncula]                                70   2e-10
gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]        69   4e-10
emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]               68   9e-10

>ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Gorilla gorilla gorilla]
          Length = 110

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/90 (51%), Positives = 50/90 (55%)
 Frame = +1

Query: 58  MAAQMSKKREFVADGVFFAELNEVLTRELAEILLRSRGPSXXXXXXXXXXXXXXXXXXXX 237
           MA Q+SKKR+FVADG+F AELNE LTRELAE                             
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAE----------------------------- 31

Query: 238 XXXXSGVEVRVTPMRIEIVILAAETQNVLG 327
               SGVEVRVTP R EI+ILA  TQNVLG
Sbjct: 32  -HGCSGVEVRVTPTRTEIIILATRTQNVLG 60


>gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
           subellipsoidea C-169]
          Length = 217

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/90 (48%), Positives = 50/90 (55%)
 Frame = +1

Query: 58  MAAQMSKKREFVADGVFFAELNEVLTRELAEILLRSRGPSXXXXXXXXXXXXXXXXXXXX 237
           MA  +SKKR+FVADGVF+AELNE+ TRELAE                             
Sbjct: 1   MATAISKKRKFVADGVFYAELNELFTRELAE----------------------------- 31

Query: 238 XXXXSGVEVRVTPMRIEIVILAAETQNVLG 327
               SGVEVRVTP+R EI+I A  TQNVLG
Sbjct: 32  -HGYSGVEVRVTPLRTEIIIRATRTQNVLG 60


>gb|AAX48878.1| S3 [Suberites domuncula]
          Length = 246

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/90 (48%), Positives = 49/90 (54%)
 Frame = +1

Query: 58  MAAQMSKKREFVADGVFFAELNEVLTRELAEILLRSRGPSXXXXXXXXXXXXXXXXXXXX 237
           MAAQ SKKR+FVADG+F AELN  L+REL+E                             
Sbjct: 1   MAAQTSKKRKFVADGIFKAELNNFLSRELSE----------------------------- 31

Query: 238 XXXXSGVEVRVTPMRIEIVILAAETQNVLG 327
               SGVEVRVTP R EI+ILA  TQNVLG
Sbjct: 32  -DGYSGVEVRVTPTRTEIIILATRTQNVLG 60


>gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]
          Length = 126

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/90 (48%), Positives = 48/90 (53%)
 Frame = +1

Query: 58  MAAQMSKKREFVADGVFFAELNEVLTRELAEILLRSRGPSXXXXXXXXXXXXXXXXXXXX 237
           MA Q+SKKR+FVADG+F AELNE  TRELAE                             
Sbjct: 1   MATQVSKKRKFVADGLFKAELNEFFTRELAE----------------------------- 31

Query: 238 XXXXSGVEVRVTPMRIEIVILAAETQNVLG 327
               SGVEVRVTP R EI+ILA  TQ VLG
Sbjct: 32  -DGYSGVEVRVTPTRTEIIILATRTQQVLG 60


>emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
          Length = 187

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 44/90 (48%), Positives = 48/90 (53%)
 Frame = +1

Query: 58  MAAQMSKKREFVADGVFFAELNEVLTRELAEILLRSRGPSXXXXXXXXXXXXXXXXXXXX 237
           MA  +SKK++FVADGVF AELN  LTRELAE                             
Sbjct: 2   MANPVSKKKKFVADGVFKAELNNFLTRELAE----------------------------- 32

Query: 238 XXXXSGVEVRVTPMRIEIVILAAETQNVLG 327
               SGVEVRVTP R EI+ILA  TQNVLG
Sbjct: 33  -DGYSGVEVRVTPTRTEIIILATRTQNVLG 61


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