BLASTX nr result

ID: Scutellaria24_contig00029771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029771
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]    68   7e-10
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    66   3e-09
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]    64   3e-09
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...    65   8e-09
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...    65   8e-09

>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -1

Query: 203 PYLRPYNGHNLQFRSHKCVFIGYSSLHKRYKCLSPSGRIYSFR 75
           P+LRPYN H LQFRS KC+F+GYSS HK Y CL P G+IY  R
Sbjct: 101 PHLRPYNSHKLQFRSSKCLFLGYSSTHKGYLCLHPFGKIYISR 143


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = -1

Query: 203 PYLRPYNGHNLQFRSHKCVFIGYSSLHKRYKCLSPS-GRIYSFR 75
           P+LRPYN H LQFRS +C F+GYS+LHK +KCL PS GR+Y  R
Sbjct: 688 PHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISR 731


>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score = 63.9 bits (154), Expect(2) = 3e-09
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = -1

Query: 206 HPYLRPYNGHNLQFRSHKCVFIGYSSLHKRYKCLSPSGRIY 84
           + YLRPYN H   FRS KC+F+GYS  HK Y+CLS SG+IY
Sbjct: 478 YSYLRPYNSHKFSFRSTKCLFLGYSPXHKGYRCLSXSGQIY 518



 Score = 21.9 bits (45), Expect(2) = 3e-09
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 97  VVGYTPSVSIEFAYLPFSFA 38
           V+ Y P VS+   +LP SF+
Sbjct: 556 VLPYCPPVSLSSTHLPTSFS 575


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 969

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -1

Query: 203 PYLRPYNGHNLQFRSHKCVFIGYSSLHKRYKCLSPS-GRIYSFR 75
           P LRPYN H LQFRS +CVF+GYSSLHK +KCL  S GR+Y  R
Sbjct: 535 PNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSR 578


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -1

Query: 203 PYLRPYNGHNLQFRSHKCVFIGYSSLHKRYKCLSPS-GRIYSFR 75
           P LRPYN H LQFRS +CVF+GYSSLHK +KCL  S GR+Y  R
Sbjct: 535 PNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSR 578


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