BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029753
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   251   4e-65
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   247   6e-64
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   246   1e-63
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              245   2e-63
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   245   2e-63

>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  251 bits (641), Expect = 4e-65
 Identities = 124/175 (70%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
 Frame = +2

Query: 2   LMQDCKFPPTESVEDCIRNYLFPHLKSPAQKASFLAYMVKCLLEAYRGRRKVDNRDDLRN 181
           L++ CKFPP ESVE+CI+ YLFP+L    QKA FL YMVKCLL +Y GRRKVDNRDD RN
Sbjct: 376 LVKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRN 435

Query: 182 KXXXXXXXXXXXXXKVHIKHAERRMVKAIQKDL--DKDIQSIGLYLDASIITNGLSRAFS 355
           K             +VH+KHAERRMVKA+Q+DL  D+ +Q I  YLDASIITNGLSRAFS
Sbjct: 436 KRLDLAGELLERELRVHVKHAERRMVKALQRDLCGDRQVQPIEHYLDASIITNGLSRAFS 495

Query: 356 TGAWVHPYKRMERTSGVVATLRRTNPLQAAADMRKTRQQVSYTGRVGDARYPHPS 520
           TG W HPYKRMER SGVVATLRRTNPLQ  AD+RKTRQQV+YTG+VGDARYPHPS
Sbjct: 496 TGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPS 550


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  247 bits (631), Expect = 6e-64
 Identities = 123/175 (70%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
 Frame = +2

Query: 2   LMQDCKFPPTESVEDCIRNYLFPHLKSPAQKASFLAYMVKCLLEAYRGRRKVDNRDDLRN 181
           L+++CKFPP ESVE+CI  YLFP+L    QKA FL YMVKCLL ++ GRRKVDNRDD RN
Sbjct: 370 LIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRN 429

Query: 182 KXXXXXXXXXXXXXKVHIKHAERRMVKAIQKDL--DKDIQSIGLYLDASIITNGLSRAFS 355
           K             + HIKHAERRMVKA+Q+DL  D+ +Q I  YLDASIITNGLSRAFS
Sbjct: 430 KRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFS 489

Query: 356 TGAWVHPYKRMERTSGVVATLRRTNPLQAAADMRKTRQQVSYTGRVGDARYPHPS 520
           TG W HPYKRMER SGVVATLRRTNPLQ  ADMRK+RQQV+YTG+VGDARYPHPS
Sbjct: 490 TGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPS 544


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron
           macrophyllum]
          Length = 1019

 Score =  246 bits (629), Expect = 1e-63
 Identities = 122/174 (70%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
 Frame = +2

Query: 5   MQDCKFPPTESVEDCIRNYLFPHLKSPAQKASFLAYMVKCLLEAYRGRRKVDNRDDLRNK 184
           +++CKFPP ES+E  + NYLFP+L    QKA FL YMVKCLL+AY GRRK+DNRDD RNK
Sbjct: 178 IENCKFPPQESIEAFLSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNK 237

Query: 185 XXXXXXXXXXXXXKVHIKHAERRMVKAIQKDL--DKDIQSIGLYLDASIITNGLSRAFST 358
                        +VH+KHAERRMVKA+Q+DL  ++ I +I  YLDASIITNGLSRAFST
Sbjct: 238 RLELAGELLERELRVHVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFST 297

Query: 359 GAWVHPYKRMERTSGVVATLRRTNPLQAAADMRKTRQQVSYTGRVGDARYPHPS 520
           GAW HPYK+MER SGVVATLRRTNPLQ  ADMRKTRQQVSYTG+VGDARYPHPS
Sbjct: 298 GAWSHPYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPS 351


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  245 bits (626), Expect = 2e-63
 Identities = 120/175 (68%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
 Frame = +2

Query: 2   LMQDCKFPPTESVEDCIRNYLFPHLKSPAQKASFLAYMVKCLLEAYRGRRKVDNRDDLRN 181
           L++ CKFPP ES+++CI  YLFP+     QKA FL YMVKCLL+AY GRRK DNRDD RN
Sbjct: 393 LVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRN 452

Query: 182 KXXXXXXXXXXXXXKVHIKHAERRMVKAIQKDL--DKDIQSIGLYLDASIITNGLSRAFS 355
           K             +VHI+HAERRMVKA+Q++L  D+D++ I  YLDASIITNGLSRAFS
Sbjct: 453 KRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFS 512

Query: 356 TGAWVHPYKRMERTSGVVATLRRTNPLQAAADMRKTRQQVSYTGRVGDARYPHPS 520
           TG W HP+KRMER SGVVATLRRTNPLQ  ADMRKTRQQV YTG+VGDARYPHPS
Sbjct: 513 TGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPS 567


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
           vinifera]
          Length = 1198

 Score =  245 bits (626), Expect = 2e-63
 Identities = 120/175 (68%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
 Frame = +2

Query: 2   LMQDCKFPPTESVEDCIRNYLFPHLKSPAQKASFLAYMVKCLLEAYRGRRKVDNRDDLRN 181
           L++ CKFPP ES+++CI  YLFP+     QKA FL YMVKCLL+AY GRRK DNRDD RN
Sbjct: 357 LVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRN 416

Query: 182 KXXXXXXXXXXXXXKVHIKHAERRMVKAIQKDL--DKDIQSIGLYLDASIITNGLSRAFS 355
           K             +VHI+HAERRMVKA+Q++L  D+D++ I  YLDASIITNGLSRAFS
Sbjct: 417 KRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFS 476

Query: 356 TGAWVHPYKRMERTSGVVATLRRTNPLQAAADMRKTRQQVSYTGRVGDARYPHPS 520
           TG W HP+KRMER SGVVATLRRTNPLQ  ADMRKTRQQV YTG+VGDARYPHPS
Sbjct: 477 TGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPS 531