BLASTX nr result

ID: Scutellaria24_contig00029667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029667
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38567.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   121   5e-26
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   112   3e-23
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   109   2e-22
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   109   2e-22

>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 3   HLKEVYTSDGYKMFSRGSGQTILPPNKNLRTGRLCGSFDNEIEYLERNALEAKEKAQHSR 182
           +LKEVYTSDGY+MFSRGS QTILPPNK  RTGRLC SFD++I+ LER AL+ +E  Q  +
Sbjct: 570 NLKEVYTSDGYRMFSRGSVQTILPPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVK 629

Query: 183 GVKRAKEEELRNLKNRLTDSKGKRINIERQFRSKELELEDVK 308
             KR  EEEL++L+++L   K +R+N ER   SK+L L+DVK
Sbjct: 630 RKKRNAEEELQDLQDKLQSIKRRRLNAERDVMSKKLRLQDVK 671


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 3   HLKEVYTSDGYKMFSRGSGQTILPPNKNLRTGRLCGSFDNEIEYLERNALEAKEKAQHSR 182
           +LKEVYTSDGY+MFSRGS QTILPPNK  RTGRLC SFD++I+ LER AL+ +E  Q  +
Sbjct: 600 NLKEVYTSDGYRMFSRGSVQTILPPNKKARTGRLCSSFDSQIKDLERYALDIQEHGQEVK 659

Query: 183 GVKRAKEEELRNLKNRLTDSKGKRINIERQFRSKELELEDVK 308
             KR  EEEL++L+++L   K +R+N ER   SK+L L+DVK
Sbjct: 660 RKKRNAEEELQDLQDKLQSIKRRRLNAERDVMSKKLRLQDVK 701


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
           communis] gi|223550086|gb|EEF51573.1| structural
           maintenance of chromosomes 6 smc6, putative [Ricinus
           communis]
          Length = 1058

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/103 (53%), Positives = 76/103 (73%)
 Frame = +3

Query: 3   HLKEVYTSDGYKMFSRGSGQTILPPNKNLRTGRLCGSFDNEIEYLERNALEAKEKAQHSR 182
           +LKEVYT DGYKMFSRGS QT+LPPNK  RTGRLC S+D++I+ LE++A   ++KA+ SR
Sbjct: 600 NLKEVYTLDGYKMFSRGSVQTVLPPNKKARTGRLCSSYDDQIKDLEQDASHVRKKAEESR 659

Query: 183 GVKRAKEEELRNLKNRLTDSKGKRINIERQFRSKELELEDVKR 311
             KR  E  L+NL+  L ++K + +N ER+  SK L + D+K+
Sbjct: 660 KRKRDSEANLQNLQRDLKNAKERCLNAERELVSKNLAVRDLKK 702


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/103 (52%), Positives = 78/103 (75%)
 Frame = +3

Query: 3   HLKEVYTSDGYKMFSRGSGQTILPPNKNLRTGRLCGSFDNEIEYLERNALEAKEKAQHSR 182
           +LKEV+T DGYKMFSRGS QTILPP +  R+GRLC SFD++I+ LE++AL  K++A+  R
Sbjct: 594 NLKEVFTLDGYKMFSRGSVQTILPPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCR 653

Query: 183 GVKRAKEEELRNLKNRLTDSKGKRINIERQFRSKELELEDVKR 311
             KR  EE+LR+L++ L ++K +  + ER   SK LEL+D+++
Sbjct: 654 KRKRVSEEQLRDLEDNLNNAKRRCRSAERFLMSKNLELQDLRK 696


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/103 (52%), Positives = 78/103 (75%)
 Frame = +3

Query: 3   HLKEVYTSDGYKMFSRGSGQTILPPNKNLRTGRLCGSFDNEIEYLERNALEAKEKAQHSR 182
           +LKEV+T DGYKMFSRGS QTILPP +  R+GRLC SFD++I+ LE++AL  K++A+  R
Sbjct: 594 NLKEVFTLDGYKMFSRGSVQTILPPVRKPRSGRLCSSFDDQIKSLEKDALNVKQEAEQCR 653

Query: 183 GVKRAKEEELRNLKNRLTDSKGKRINIERQFRSKELELEDVKR 311
             KR  EE+LR+L++ L ++K +  + ER   SK LEL+D+++
Sbjct: 654 KRKRVSEEQLRDLEDNLNNAKRRCRSAERFLMSKNLELQDLRK 696


Top