BLASTX nr result

ID: Scutellaria24_contig00029608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029608
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...    74   2e-11
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...    71   1e-10
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...    68   7e-10
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...    64   1e-08

>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
            predicted protein [Populus trichocarpa]
          Length = 2219

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239  TSNSSMTNLDSDIKLEELKASISALLLLPIFSSSTDTGIDLSQGSIKNPG-GAGSGTDVG 63
            T +     + +++ +EELKASISALL LPI S+S+DTG+D SQGS+K P    GS  DV 
Sbjct: 776  TQSRPSAKVKNEMDIEELKASISALLQLPICSTSSDTGLDESQGSVKRPAESIGSKMDV- 834

Query: 62   EETSGCEDCKRVKKQKLSEE 3
             ET GCEDC++ K+QKLSEE
Sbjct: 835  VETPGCEDCRKAKRQKLSEE 854


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
 Frame = -1

Query: 308  KKHKHQ----RSFGSGSPFFELGHLEVTSNSSMTNLDSDIKLEELKASISALLLLPIFSS 141
            +K KH     +   S + F +   ++  SN     +  +  ++ELK+SIS LL LP  SS
Sbjct: 802  QKQKHHTTSIKDSASSASFDQWRTIQSQSNLLTKKIKRNADIKELKSSISLLLQLPNLSS 861

Query: 140  STDTGIDLSQGSIKNPGGAGSG-TDVGEETSGCEDCKRVKKQKLSEE 3
            S+DTG++ SQ S+K    + S   D+ E T GCEDC+R K+QKLSEE
Sbjct: 862  SSDTGLEESQSSVKRAAESISNKMDLFEGTPGCEDCRRAKRQKLSEE 908


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239  TSNSSMTNLDSDIKLEELKASISALLLLP-IFSSSTDTGIDLSQGSIKNPGGAGSGTDVG 63
            ++ +S  N   D  +EELK  IS LL LP   S+ + TG+D SQGS++ P G+ + +D+ 
Sbjct: 838  SNKTSSKNAKDDNGVEELKTFISTLLQLPKSLSNLSTTGLDESQGSVRKPIGSHNKSDLV 897

Query: 62   EETSGCEDCKRVKKQKLSEE 3
            E T GCE+C++ K+QKLSEE
Sbjct: 898  EATPGCEECRKAKRQKLSEE 917


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
 Frame = -1

Query: 209  SDIKLEELKASISALLLLPIFSS-STDTGIDLSQGSIKNPGGAGSGT-DVGEETSGCEDC 36
            S+  +EELKA+IS LL LP  S+ S DTG+D SQGS+K   G+     D+ E T GCE+C
Sbjct: 839  SNADIEELKAAISGLLQLPNSSTTSADTGLDESQGSVKKSVGSNCNKMDLVEGTPGCEEC 898

Query: 35   KRVKKQKLSEE 3
            +R K+QKLSE+
Sbjct: 899  RRAKRQKLSED 909


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
            dehydrogenase, lipoyl-binding site [Medicago truncatula]
            gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
            transcription subunit [Medicago truncatula]
          Length = 2270

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = -1

Query: 197  LEELKASISALLLLP-IFSSSTDTGIDLSQGSIKNPGGAGSGTDVGEETSGCEDCKRVKK 21
            +++LK +IS LL LP   S+ T TG+  SQGS+K P    +  DV E T GCE+C+R KK
Sbjct: 848  VDDLKKAISVLLQLPKSLSNLTITGLGESQGSVKRPFRCHNKIDVMEATPGCEECRRAKK 907

Query: 20   QKLSEE 3
            QKLSEE
Sbjct: 908  QKLSEE 913


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