BLASTX nr result

ID: Scutellaria24_contig00029589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029589
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24
emb|CBI21323.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18

>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/114 (52%), Positives = 78/114 (68%)
 Frame = -3

Query: 344 PDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTLLTKFVRCLCKEGFFLPASQL 165
           PD + Y SLLQGLCQ   LE A EVF+ SV+QDV L  TLL+ F+ CLCK G FL AS+L
Sbjct: 501 PDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATLLSTFILCLCKVGHFLAASKL 560

Query: 164 LRELTCGKAVRSVESHLTLLRYLADTGELSLASEHLQWIADKSPALLHGIPPDL 3
           LR L     V   +SH+TLL+  AD GE+SLA +H++W+ + SP++L  I  +L
Sbjct: 561 LRGL--ASDVAHPDSHVTLLKGFADAGEVSLAKQHVEWVQETSPSMLSVISTEL 612


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/114 (50%), Positives = 74/114 (64%)
 Frame = -3

Query: 344 PDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTLLTKFVRCLCKEGFFLPASQL 165
           PD +TY SLL+GLCQ K  E A EVF  SV+QDV L  T+L  F+  +CKEG FL AS+L
Sbjct: 501 PDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVMLAQTILNTFILYICKEGNFLFASKL 560

Query: 164 LRELTCGKAVRSVESHLTLLRYLADTGELSLASEHLQWIADKSPALLHGIPPDL 3
           L  LT    V   +SH+  L+YLAD  E+S A EH++W+ D  P++L  I  +L
Sbjct: 561 LCGLTYD--VGHSDSHVIFLKYLADASEISTAIEHIKWVGDTLPSMLPTISTEL 612


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/114 (50%), Positives = 74/114 (64%)
 Frame = -3

Query: 344 PDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTLLTKFVRCLCKEGFFLPASQL 165
           PD +TY SLL+GLCQ K  E A EVF  SV+QDV L  T+L  F+  +CKEG FL AS+L
Sbjct: 501 PDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVMLAQTILNTFILYICKEGNFLFASKL 560

Query: 164 LRELTCGKAVRSVESHLTLLRYLADTGELSLASEHLQWIADKSPALLHGIPPDL 3
           L  LT    V   +SH+  L+YLAD  E+S A EH++W+ D  P++L  I  +L
Sbjct: 561 LCGLTYD--VGHSDSHVIFLKYLADASEISTAIEHIKWVGDTLPSMLPTISTEL 612


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/114 (49%), Positives = 74/114 (64%)
 Frame = -3

Query: 344 PDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTLLTKFVRCLCKEGFFLPASQL 165
           PD + Y SLLQGLCQ   LE A EVF+ SV+QDV L  TLL+ F+ C      FL AS+L
Sbjct: 501 PDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATLLSTFILC-----HFLAASKL 555

Query: 164 LRELTCGKAVRSVESHLTLLRYLADTGELSLASEHLQWIADKSPALLHGIPPDL 3
           LR L     V   +SH+TLL+  AD GE+SLA +H++W+ + SP++L  I  +L
Sbjct: 556 LRGL--ASDVAHPDSHVTLLKGFADAGEVSLAKQHVEWVQETSPSMLSVISTEL 607


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/110 (43%), Positives = 71/110 (64%)
 Frame = -3

Query: 344 PDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTLLTKFVRCLCKEGFFLPASQL 165
           PD ++Y  LL+GLCQ   LE A E++N SVKQD+ L   +L+ F+  LC++G  + AS+L
Sbjct: 497 PDVTSYTLLLEGLCQEDKLEAAFELYNKSVKQDIILARDILSSFISSLCRKGHLMAASKL 556

Query: 164 LRELTCGKAVRSVESHLTLLRYLADTGELSLASEHLQWIADKSPALLHGI 15
           L  L     +   ESH+ LL  LA+  E+ +A EHL+W+ +KSP++L  I
Sbjct: 557 LCSL--NHDIGCAESHVILLESLANAQEIPIAIEHLKWVQEKSPSILQDI 604


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