BLASTX nr result

ID: Scutellaria24_contig00029583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029583
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22109.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,...    61   1e-07
ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = +2

Query: 218 VLSNSILNRASLSTQNSAEETT--DEILNRIIAAGE-DPSFSREEHCIDYIRKLCDAGNF 388
           +LS SI +  SL+T+ S +E    DE LN I++  E  P FS E+ C  YI KL  AGN 
Sbjct: 55  ILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYIDKLLKAGNP 114

Query: 389 QAATLLPQTLRGKHIFLGPRAYNYILEAAERKNDV 493
            AA    Q+L  KHIFL P AYN +L AA   N +
Sbjct: 115 SAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAI 149


>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11900-like [Vitis vinifera]
          Length = 357

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = +2

Query: 218 VLSNSILNRASLSTQNSAEETT--DEILNRIIAAGE-DPSFSREEHCIDYIRKLCDAGNF 388
           +LS SI +  SL+T+ S +E    DE LN I++  E  P FS E+ C  YI KL  AGN 
Sbjct: 26  ILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEKLCTTYIDKLLKAGNP 85

Query: 389 QAATLLPQTLRGKHIFLGPRAYNYILEAAERKNDV 493
            AA    Q+L  KHIFL P AYN +L AA   N +
Sbjct: 86  SAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAI 120


>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 405

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/110 (33%), Positives = 61/110 (55%)
 Frame = +2

Query: 158 MAVFIVKYIPFRASRVCSLPVLSNSILNRASLSTQNSAEETTDEILNRIIAAGEDPSFSR 337
           + V  ++++ F   R+   P+       +ASL+     +E  +  LN I+AA ++   S 
Sbjct: 67  LTVVKLRFLLFLPQRIRVSPI-------KASLNE----DEVAEAYLNIILAAIQNAPSSI 115

Query: 338 EEHCIDYIRKLCDAGNFQAATLLPQTLRGKHIFLGPRAYNYILEAAERKN 487
           EE C  Y+ KLC++G+   A  L Q+L+ ++I LGP AYN ++EAA   N
Sbjct: 116 EEICTGYLHKLCNSGSLFVAVRLLQSLQNRNITLGPNAYNLVMEAAGEAN 165


>ref|XP_002313272.1| predicted protein [Populus trichocarpa] gi|222849680|gb|EEE87227.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
 Frame = +2

Query: 191 RASRVCSLPVLSNSIL-----------NRASLSTQNS--AEETTDEILNRIIAAGED-PS 328
           R + + S+PV S+ IL           +   L+T+ S   EE  D+ LN+++ A E+ P 
Sbjct: 30  RKNCITSIPVGSHWILPHFATITEVIGHYKQLTTRASFDGEEIKDDNLNQMLEAVENAPE 89

Query: 329 FSREEHCIDYIRKLCDAGNFQAATLLPQTLRGKHIFLGPRAYNYILEAAERKNDV 493
            +  +    Y+  LC AG   AA  L + LR K+IFLGP AYN IL  A  KNDV
Sbjct: 90  CTTRKVGTAYVHNLCKAGTLFAAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDV 144


>ref|XP_002299968.1| predicted protein [Populus trichocarpa] gi|222847226|gb|EEE84773.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +2

Query: 275 ETTDEILNRIIAAGED-PSFSREEHCIDYIRKLCDAGNFQAATLLPQTLRGKHIFLGPRA 451
           E  D+ LN++I A E+ P  +  +    Y+  LC AGN   A  L Q+L  K+IFLGP A
Sbjct: 41  EVKDDNLNQMINAVENAPESATRKIGTAYVHNLCKAGNLFTAVRLLQSLCDKNIFLGPSA 100

Query: 452 YNYILEAAERKNDV 493
           YN IL AA  KND+
Sbjct: 101 YNIILVAASEKNDI 114


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