BLASTX nr result

ID: Scutellaria24_contig00029579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029579
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...    72   5e-11
ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...    69   5e-10
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003632967.1| PREDICTED: zinc finger CCCH domain-containin...    60   1e-07
emb|CBI30597.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
            [Glycine max]
          Length = 713

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 54/191 (28%)
 Frame = -1

Query: 415  LYDPMRDGIDKKDVGDGRLKFSHSDQGSSVK-------------------DLNVQSNS-- 299
            LYDP+RD I+  ++GDG LK S    GS+V+                   +LN   +S  
Sbjct: 473  LYDPLRDSIEIPNIGDGSLKASLLIHGSNVQVSSQVRTYGDSAVVGEHMSNLNDDKSSVS 532

Query: 298  ---------------------LPEEEKLFNSAHAG------------DTMKDNVLSSSCG 218
                                 LP E ++ +  + G            D+ K+    + C 
Sbjct: 533  SHNKFCENEPNKNCLPHEKDCLPPETEITSGTYQGKMGMGQHTFGVADSTKNERDVTEC- 591

Query: 217  DKLKFDKERDKPVLEVSGSANTDKTEVDFKEDCHIQSESKALKIFQSALIDFVKELVRPT 38
            D  +  +        V       + +VDF+ D  IQ ESKALK F++AL+D VKEL++P 
Sbjct: 592  DARRHGEGSGHKKKRVDRDKKNHEMDVDFQIDGSIQKESKALKFFRAALVDHVKELLKPA 651

Query: 37   WQKGLLSKDAH 5
            W +G LSKDAH
Sbjct: 652  WHEGHLSKDAH 662


>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 57/194 (29%)
 Frame = -1

Query: 415  LYDPMRDGIDKKDVGDGRLKFSHSDQGSSVK-------------------DLNVQSNSLP 293
            LYDP+R+ I+  ++GDG LK S   +GSSV+                   D+N   +S+ 
Sbjct: 647  LYDPLRNSIEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVS 706

Query: 292  EEEKLFNSAHAGDTM---------KDNVLSSSCG-----------------DKLKFDKER 191
               K + +     ++         K  + S +C                  D+++  K+R
Sbjct: 707  SHHKFYENEPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGVEDRIETLKKR 766

Query: 190  ---------DKPVLEVSGSANTDK---TEVDFKEDCHIQSESKALKIFQSALIDFVKELV 47
                     D+   + +  A  +K    EVDF+ D  +  E+K LKIF + L+D VKEL+
Sbjct: 767  TEHDARHHSDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELL 826

Query: 46   RPTWQKGLLSKDAH 5
            +P W +G LSKDAH
Sbjct: 827  KPFWHEGRLSKDAH 840


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 56/197 (28%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
 Frame = -1

Query: 418  SLYDPMRDGIDKKDVGDGRLKFSHSDQGSSVK-------------------DLNVQSNSL 296
            S YDP+RD     +VGD   KFS    G+S+                    + N   +++
Sbjct: 421  SKYDPLRDSFVLPNVGDKSFKFSFFSLGASISNTSQQPIYGDSLSNRNFGTEFNGDKSTI 480

Query: 295  PEEEKLFNS---------------------------AHAGDTMKDNVLSSSCGDKL---- 209
               +K   S                              G  +K+   S    DK+    
Sbjct: 481  SSHDKPHGSLSDKNCSTPGKDSFTTATVTGGAGTADGENGSALKEESASGIGYDKVNRVT 540

Query: 208  -KFDKE--------RDKPVLEVSGSANTDKTEVDFKEDCHIQSESKALKIFQSALIDFVK 56
             K D++        R K  L+       +  EVD K     Q ESK L+ F+SALIDFVK
Sbjct: 541  NKIDRDARPQTDGSRHKKDLKADSVRQNNDMEVDQKIGGDTQKESKVLRHFRSALIDFVK 600

Query: 55   ELVRPTWQKGLLSKDAH 5
            +L++PTW++G LSKDAH
Sbjct: 601  DLLKPTWREGHLSKDAH 617


>ref|XP_003632967.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Vitis vinifera]
          Length = 489

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -1

Query: 136 DFKEDCHIQSESKALKIFQSALIDFVKELVRPTWQKGLLSKDAH 5
           D K D  +Q ESKAL+ F+  LIDF+K+LVRPTW +G LSKDAH
Sbjct: 387 DHKIDEDVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAH 430


>emb|CBI30597.3| unnamed protein product [Vitis vinifera]
          Length = 745

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -1

Query: 136 DFKEDCHIQSESKALKIFQSALIDFVKELVRPTWQKGLLSKDAH 5
           D K D  +Q ESKAL+ F+  LIDF+K+LVRPTW +G LSKDAH
Sbjct: 643 DHKIDEDVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAH 686


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