BLASTX nr result

ID: Scutellaria24_contig00029568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029568
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   196   2e-48
ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co...   188   3e-46
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   187   6e-46
ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   187   8e-46

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  196 bits (498), Expect = 2e-48
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +2

Query: 2   KKQPGSGAERSFVQFVLEPLYKLYSQVIGEHKKSVEATLAELGVTLSNAAYRLNVRPLLR 181
           KK P SG ERSFVQFVLEPLYK+YSQVIGEHKKSVE+TLAELGVTLSNAAY+LNVRPLLR
Sbjct: 316 KKPPASGGERSFVQFVLEPLYKIYSQVIGEHKKSVESTLAELGVTLSNAAYKLNVRPLLR 375

Query: 182 LACSSVFGSATGFTDMLVQHIPSAKDAAPWKVEHIYTGPKDSTIYQAM 325
           LACSSVFGSATGFTDMLVQHIPSAKDAA  KV+HIYTGPKDS IYQAM
Sbjct: 376 LACSSVFGSATGFTDMLVQHIPSAKDAAAKKVDHIYTGPKDSAIYQAM 423


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  196 bits (498), Expect = 2e-48
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +2

Query: 2   KKQPGSGAERSFVQFVLEPLYKLYSQVIGEHKKSVEATLAELGVTLSNAAYRLNVRPLLR 181
           KK P SG ERSFVQFVLEPLYK+YSQVIGEHKKSVE+TLAELGVTLSNAAY+LNVRPLLR
Sbjct: 373 KKPPASGGERSFVQFVLEPLYKIYSQVIGEHKKSVESTLAELGVTLSNAAYKLNVRPLLR 432

Query: 182 LACSSVFGSATGFTDMLVQHIPSAKDAAPWKVEHIYTGPKDSTIYQAM 325
           LACSSVFGSATGFTDMLVQHIPSAKDAA  KV+HIYTGPKDS IYQAM
Sbjct: 433 LACSSVFGSATGFTDMLVQHIPSAKDAAAKKVDHIYTGPKDSAIYQAM 480


>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
           [Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
           small nuclear ribonucleoprotein component, putative
           [Ricinus communis]
          Length = 992

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/108 (86%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   KKQPGSGAERSFVQFVLEPLYKLYSQVIGEHKKSVEATLAELGVTLSNAAYRLNVRPLLR 181
           KK P SG ERSFV FVLEPLYK+YSQVIGEHKKSVEATLAELGVTL NAAY+LNVRPLLR
Sbjct: 376 KKSPASGGERSFVHFVLEPLYKIYSQVIGEHKKSVEATLAELGVTLPNAAYKLNVRPLLR 435

Query: 182 LACSSVFGSATGFTDMLVQHIPSAKDAAPWKVEHIYTGPKDSTIYQAM 325
           LACS VFGSA+GFTDMLVQHIPSAK+AA  KV+H+YTGPKDSTIY+AM
Sbjct: 436 LACSRVFGSASGFTDMLVQHIPSAKNAAAKKVDHVYTGPKDSTIYKAM 483


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Cucumis sativus]
           gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
           small nuclear ribonucleoprotein component-like [Cucumis
           sativus]
          Length = 988

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/108 (85%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   KKQPGSGAERSFVQFVLEPLYKLYSQVIGEHKKSVEATLAELGVTLSNAAYRLNVRPLLR 181
           KKQP SG ERSFVQFVLEPLYK+YSQVIGEH+KSVE TLAELGVTLSNAAY+LNVRPLLR
Sbjct: 373 KKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSNAAYKLNVRPLLR 432

Query: 182 LACSSVFGSATGFTDMLVQHIPSAKDAAPWKVEHIYTGPKDSTIYQAM 325
           LACSSVFG A+GFTDMLVQHIPS +DA+  KV+HIYTGPKDS IY+AM
Sbjct: 433 LACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 480


>ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Glycine max]
          Length = 988

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/108 (86%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   KKQPGSGAERSFVQFVLEPLYKLYSQVIGEHKKSVEATLAELGVTLSNAAYRLNVRPLLR 181
           KK P SG ERSFV+FVLEPLYK+YSQVIGEHKKSVE TLAELGVTLSNAAYRLNVRPLLR
Sbjct: 373 KKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLSNAAYRLNVRPLLR 432

Query: 182 LACSSVFGSATGFTDMLVQHIPSAKDAAPWKVEHIYTGPKDSTIYQAM 325
           LACSSVFG A+GFTDMLVQHIPS +DAA  KV+HIYTGPKDS+IY+AM
Sbjct: 433 LACSSVFGPASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDSSIYKAM 480


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