BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029470
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   152   4e-35
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   151   6e-35
ref|NP_172112.1| U5 small nuclear ribonucleoprotein component [A...   143   1e-32
dbj|BAE98631.1| elongation factor like protein [Arabidopsis thal...   143   1e-32
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32

>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Cucumis sativus]
           gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
           small nuclear ribonucleoprotein component-like [Cucumis
           sativus]
          Length = 988

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/118 (64%), Positives = 84/118 (71%)
 Frame = +2

Query: 35  MDDSLYDEFGNYIGPXXXXXXXXXXXXXXXXXXXXXXXXXPMSDDERGPGKPNGWLTTTD 214
           MDDSLYDEFGNYIGP                          +SD E   G  NGW+TT++
Sbjct: 1   MDDSLYDEFGNYIGPEIDSDKDSDIEDEDENLMEKPEEDEGVSDGEDAGGASNGWITTSN 60

Query: 215 DVDMDGQIVLAEDKKYYPTAEEVYGEEVETLVMDEDEQPLEQPIIKPVKNLKFELGVK 388
           DVDMD QIVLAEDKKYYPTAEEVYGE+VETLVMDEDE PLEQPIIKPV+N+KFE+GVK
Sbjct: 61  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVK 118


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/118 (64%), Positives = 83/118 (70%)
 Frame = +2

Query: 35  MDDSLYDEFGNYIGPXXXXXXXXXXXXXXXXXXXXXXXXXPMSDDERGPGKPNGWLTTTD 214
           MDDSLYDEFGNYIGP                          +SD E      NGW+T ++
Sbjct: 1   MDDSLYDEFGNYIGPEIESDRESDGDDQDEDIPDKPDEEEMVSDVEDAVAASNGWITASN 60

Query: 215 DVDMDGQIVLAEDKKYYPTAEEVYGEEVETLVMDEDEQPLEQPIIKPVKNLKFELGVK 388
           DVDMD QIVLAEDKKYYPTAEEVYGE+VETLVMDEDEQPLEQPIIKPV+N+KFELGVK
Sbjct: 61  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFELGVK 118


>ref|NP_172112.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana]
           gi|30679607|ref|NP_849600.1| U5 small nuclear
           ribonucleoprotein component [Arabidopsis thaliana]
           gi|8844127|gb|AAF80219.1|AC025290_8 Contains similarity
           to an U5 snRNP-specific protein 116 kD from Homo sapiens
           gi|4759280 and contains elongation factor G C-terminus
           PF|00679 and is a member of the elongation factor Tu
           family PF|00009 [Arabidopsis thaliana]
           gi|110741512|dbj|BAE98706.1| elongation factor like
           protein [Arabidopsis thaliana]
           gi|332189840|gb|AEE27961.1| U5 small nuclear
           ribonucleoprotein component [Arabidopsis thaliana]
           gi|332189841|gb|AEE27962.1| U5 small nuclear
           ribonucleoprotein component [Arabidopsis thaliana]
          Length = 987

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/118 (60%), Positives = 84/118 (71%)
 Frame = +2

Query: 35  MDDSLYDEFGNYIGPXXXXXXXXXXXXXXXXXXXXXXXXXPMSDDERGPGKPNGWLTTTD 214
           M+ SLYDEFGNY+GP                           SD E+GPG  NGW+TT +
Sbjct: 1   MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 59

Query: 215 DVDMDGQIVLAEDKKYYPTAEEVYGEEVETLVMDEDEQPLEQPIIKPVKNLKFELGVK 388
           DV+M+ QIVL EDKKYYPTAEEVYGE+VETLVMDEDEQPLEQPIIKPV++++FE+GVK
Sbjct: 60  DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVK 117


>dbj|BAE98631.1| elongation factor like protein [Arabidopsis thaliana]
          Length = 693

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/118 (60%), Positives = 84/118 (71%)
 Frame = +2

Query: 35  MDDSLYDEFGNYIGPXXXXXXXXXXXXXXXXXXXXXXXXXPMSDDERGPGKPNGWLTTTD 214
           M+ SLYDEFGNY+GP                           SD E+GPG  NGW+TT +
Sbjct: 1   MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 59

Query: 215 DVDMDGQIVLAEDKKYYPTAEEVYGEEVETLVMDEDEQPLEQPIIKPVKNLKFELGVK 388
           DV+M+ QIVL EDKKYYPTAEEVYGE+VETLVMDEDEQPLEQPIIKPV++++FE+GVK
Sbjct: 60  DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVK 117


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
           predicted protein [Populus trichocarpa]
          Length = 869

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/118 (61%), Positives = 78/118 (66%)
 Frame = +2

Query: 35  MDDSLYDEFGNYIGPXXXXXXXXXXXXXXXXXXXXXXXXXPMSDDERGPGKPNGWLTTTD 214
           MDD+LYDEFGNYIGP                           SD E      NGWLT  +
Sbjct: 1   MDDNLYDEFGNYIGPEIESDRESDGEEEDEELPDKPHEDEEESDGEEAVHASNGWLTAPN 60

Query: 215 DVDMDGQIVLAEDKKYYPTAEEVYGEEVETLVMDEDEQPLEQPIIKPVKNLKFELGVK 388
           DVDMD Q+VLAEDKKYYPTAEEVYG  VETLV DEDEQPLEQPIIKPV+N+KFE+GVK
Sbjct: 61  DVDMDNQVVLAEDKKYYPTAEEVYGPGVETLVNDEDEQPLEQPIIKPVRNIKFEVGVK 118