BLASTX nr result

ID: Scutellaria24_contig00029466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029466
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31941.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g...   124   6e-27
emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]   124   6e-27
ref|XP_002316129.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g...   108   6e-22

>emb|CBI31941.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 2/122 (1%)
 Frame = -3

Query: 360 KYKLIHMGQRSDYGKGSHMLSDHSGSEEGKRRNQNEEKELSFIGLDHTVYRYLCPLRKXX 181
           K  L+  GQR+DYGK SH  SD+ G+   KRRN  ++KE   IG++ TVYRYLCP+RK  
Sbjct: 62  KISLLMAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIG 121

Query: 180 XXXXXXXXIAKQLRAQTQSRIRISKPISGCDDRVVTIYSTSDETNSYGD--EHICPAQEA 7
                   IAKQLR++T+S IRI + + GC++RVVTIYS+S+ETN +GD  E + PAQ+A
Sbjct: 122 SIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDA 181

Query: 6   LF 1
           LF
Sbjct: 182 LF 183


>ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 517

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = -3

Query: 339 GQRSDYGKGSHMLSDHSGSEEGKRRNQNEEKELSFIGLDHTVYRYLCPLRKXXXXXXXXX 160
           GQR+DYGK SH  SD+ G+   KRRN  ++KE   IG++ TVYRYLCP+RK         
Sbjct: 3   GQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGG 62

Query: 159 XIAKQLRAQTQSRIRISKPISGCDDRVVTIYSTSDETNSYGD--EHICPAQEALF 1
            IAKQLR++T+S IRI + + GC++RVVTIYS+S+ETN +GD  E + PAQ+ALF
Sbjct: 63  DIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALF 117


>emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
          Length = 543

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = -3

Query: 339 GQRSDYGKGSHMLSDHSGSEEGKRRNQNEEKELSFIGLDHTVYRYLCPLRKXXXXXXXXX 160
           GQR+DYGK SH  SD+ G+   KRRN  ++KE   IG++ TVYRYLCP+RK         
Sbjct: 3   GQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGG 62

Query: 159 XIAKQLRAQTQSRIRISKPISGCDDRVVTIYSTSDETNSYGD--EHICPAQEALF 1
            IAKQLR++T+S IRI + + GC++RVVTIYS+S+ETN +GD  E + PAQ+ALF
Sbjct: 63  DIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALF 117


>ref|XP_002316129.1| predicted protein [Populus trichocarpa] gi|222865169|gb|EEF02300.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 4/117 (3%)
 Frame = -3

Query: 339 GQRSDYGKGS-HMLSDHSGSEEGKRRNQNEE-KELSFIGLDHTVYRYLCPLRKXXXXXXX 166
           GQR+DYGK S H  SD+ G   GKRRN  ++  + + I  + TVYRYLCPLRK       
Sbjct: 3   GQRNDYGKRSQHSQSDYGG---GKRRNPGDDPSDQNTITNEDTVYRYLCPLRKIGSIIGK 59

Query: 165 XXXIAKQLRAQTQSRIRISKPISGCDDRVVTIYSTSDETNSYGD--EHICPAQEALF 1
              IAKQLRA ++S IRIS+ + G D+R+VTIYS+S+ETN +G+  E++CPAQ+ALF
Sbjct: 60  GGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLFGETGEYVCPAQDALF 116


>ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 548

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/115 (49%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
 Frame = -3

Query: 339 GQRSDYGKGSHMLSDHSGSEEGKRRNQNEEKELSFIGLDHTVYRYLCPLRKXXXXXXXXX 160
           GQRS YGK  H  SDH      KRRN  +++E   I L+ TVYRY+CP RK         
Sbjct: 3   GQRSGYGKRPHSQSDHDNGPN-KRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGRGG 61

Query: 159 XIAKQLRAQTQSRIRISKPISGCDDRVVTIYSTSDETNSY--GDEHICPAQEALF 1
            I KQLR +T+++IRI + + GC++RVVTIYS SDETN+   G  ++ PAQ+ALF
Sbjct: 62  EIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVSPAQDALF 116


Top