BLASTX nr result

ID: Scutellaria24_contig00029431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029431
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   140   8e-32
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_002890375.1| pentatricopeptide repeat-containing protein ...   117   7e-25

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -3

Query: 242 ALLSSCRLHHNVSLGELAAGKLFELEPRNPGNYVLLSNIYASKGKWKEVDKVRDIMRGKG 63
           ALLSSCR+H+NVSLGE+AA KLFELEP NPGNY+LLSNIYASKG W EV++VRD+M+ KG
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 62  LKKYPGCSWIEVKNKVHMLL 3
           L+K PGCSWIEVKNKVHMLL
Sbjct: 620 LRKNPGCSWIEVKNKVHMLL 639


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -3

Query: 242 ALLSSCRLHHNVSLGELAAGKLFELEPRNPGNYVLLSNIYASKGKWKEVDKVRDIMRGKG 63
           ALLSSCR+H+NVSLGE+AA KLFELEP NPGNY+LLSNIYASKG W EV++VRD+M+ KG
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 62  LKKYPGCSWIEVKNKVHMLL 3
           L+K PGCSWIEVKNKVHMLL
Sbjct: 620 LRKNPGCSWIEVKNKVHMLL 639


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/80 (76%), Positives = 70/80 (87%)
 Frame = -3

Query: 242 ALLSSCRLHHNVSLGELAAGKLFELEPRNPGNYVLLSNIYASKGKWKEVDKVRDIMRGKG 63
           ALLSSCR+H+ V LGE+AA ++FELEPRNPGNY+LLSNIYASK  W EVD VRD+MR +G
Sbjct: 518 ALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRG 577

Query: 62  LKKYPGCSWIEVKNKVHMLL 3
           LKK PG SWIE+KNKVHMLL
Sbjct: 578 LKKNPGYSWIEIKNKVHMLL 597


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = -3

Query: 242 ALLSSCRLHHNVSLGELAAGKLFELEPRNPGNYVLLSNIYASKGKWKEVDKVRDIMRGKG 63
           ALLSSCR+H+N+SLGE+AA KLF LEP NPGNY+LLSNIYASKG W E +++R++M+ KG
Sbjct: 550 ALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKG 609

Query: 62  LKKYPGCSWIEVKNKVHMLL 3
           L+K PG SWIEV +KVHMLL
Sbjct: 610 LRKNPGYSWIEVGHKVHMLL 629


>ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336217|gb|EFH66634.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 760

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/80 (68%), Positives = 64/80 (80%)
 Frame = -3

Query: 242 ALLSSCRLHHNVSLGELAAGKLFELEPRNPGNYVLLSNIYASKGKWKEVDKVRDIMRGKG 63
           ALL+SCRL +NV L E+AA KLF LEP NPG YVL+SNIYA+KG W EVD +R+ M   G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLG 621

Query: 62  LKKYPGCSWIEVKNKVHMLL 3
           LKK PGCSWI+VKNKV+ LL
Sbjct: 622 LKKNPGCSWIQVKNKVYTLL 641


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