BLASTX nr result

ID: Scutellaria24_contig00029416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029416
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...    99   6e-19
emb|CBI27748.3| unnamed protein product [Vitis vinifera]               99   6e-19
ref|NP_190937.1| RING/U-box domain-containing protein [Arabidops...    98   8e-19
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...    93   2e-17
ref|XP_003533804.1| PREDICTED: putative uncharacterized protein ...    93   3e-17

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = -1

Query: 230 GECSNSKEPEPPRPRFTCEICTDEKAASEAFNVLGCTHAYCAECVARYVASKVQDNVSTI 51
           G+ SNSK P+PP P F CEIC D K  + +F++ GC H+YC++C+ +YVASK+QDNVS I
Sbjct: 110 GQPSNSK-PDPP-PTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRI 167

Query: 50  GCPVVGCRGYFEPQQC 3
            CP   C G  EPQQC
Sbjct: 168 SCPAPNCTGVLEPQQC 183


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = -1

Query: 230 GECSNSKEPEPPRPRFTCEICTDEKAASEAFNVLGCTHAYCAECVARYVASKVQDNVSTI 51
           G+ SNSK P+PP P F CEIC D K  + +F++ GC H+YC++C+ +YVASK+QDNVS I
Sbjct: 110 GQPSNSK-PDPP-PTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRI 167

Query: 50  GCPVVGCRGYFEPQQC 3
            CP   C G  EPQQC
Sbjct: 168 SCPAPNCTGVLEPQQC 183


>ref|NP_190937.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|6729520|emb|CAB67676.1| putative protein [Arabidopsis
           thaliana] gi|21536688|gb|AAM61020.1| unknown
           [Arabidopsis thaliana] gi|332645607|gb|AEE79128.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 320

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 27/145 (18%)
 Frame = -1

Query: 356 SKKGSTKHDPIPVDNY-------------------RSRIKARVVIDLSDDSA-------- 258
           S +GSTK D I V+NY                   +S     + +DL DD          
Sbjct: 35  SARGSTKRDAISVENYDRDRKLQRLWVYPPHKTVIKSESPIYIDLDLYDDEDDDIRILCF 94

Query: 257 APPRRRLYRGECSNSKEPEPPRPRFTCEICTDEKAASEAFNVLGCTHAYCAECVARYVAS 78
           APP  R  +G+ S+SK        F CEIC D K+  E+F + GC+H YC +CV++Y+A+
Sbjct: 95  APPIHR-EKGQSSSSKTAT-----FDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAA 148

Query: 77  KVQDNVSTIGCPVVGCRGYFEPQQC 3
           K+QDN+ +I CPV GC G  EP QC
Sbjct: 149 KLQDNILSIECPVSGCSGRLEPDQC 173


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = -1

Query: 227 ECSNSKEPEPPRPRFTCEICTDEKAASEAFNVLGCTHAYCAECVARYVASKVQDNVSTIG 48
           E  +S EP    P+F CEIC + K A E+  + GCTHAYC +C+A+YVASK+Q+N++ I 
Sbjct: 192 EKGHSSEPND-HPQFVCEICVESKTADESLAIRGCTHAYCTDCMAKYVASKIQENITGIY 250

Query: 47  CPVVGCRGYFEPQQC 3
           CPV GC G  EP+ C
Sbjct: 251 CPVSGCGGLLEPEYC 265


>ref|XP_003533804.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Glycine max]
          Length = 333

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/144 (37%), Positives = 73/144 (50%), Gaps = 21/144 (14%)
 Frame = -1

Query: 371 YATSSSKKGSTKHDPIPVDNY----RSRIKARVVIDLSDDSAAPPRRRLY---------- 234
           + T  S +G+TK + I V+ Y     S      VI+LSD       R L           
Sbjct: 50  FTTPISLQGTTKSNAISVEQYDGVSASASSPVHVINLSDTEDDDEVRILNFTPINTSFGK 109

Query: 233 -------RGECSNSKEPEPPRPRFTCEICTDEKAASEAFNVLGCTHAYCAECVARYVASK 75
                  +GECSNS         F CEICT+ K A ++F+++GC H YC  CVA+YV SK
Sbjct: 110 RSKKSSSKGECSNSAS-------FVCEICTETKTARDSFSIIGCHHVYCNSCVAQYVESK 162

Query: 74  VQDNVSTIGCPVVGCRGYFEPQQC 3
           +++N+ +I CPV GCRG  E   C
Sbjct: 163 LEENIVSIPCPVPGCRGLLEADDC 186


Top