BLASTX nr result

ID: Scutellaria24_contig00029353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029353
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32614.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002525184.1| pentatricopeptide repeat-containing protein,...    94   1e-17

>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/82 (67%), Positives = 61/82 (74%)
 Frame = -1

Query: 246 ISLSSTDATNKLATSQDYVLLTLLQQRKTEEAWLMYAQCAQLPSTTCLSRLVSQLSYLNT 67
           +S  +T        S +  LLTLL+QRKTEEAWL Y QC QLPS TCLSRLVSQLSY NT
Sbjct: 73  VSFITTTTATTPHHSLNQTLLTLLRQRKTEEAWLTYVQCTQLPSPTCLSRLVSQLSYQNT 132

Query: 66  TEGLTRAQSIIERLRRERQLHR 1
            + LTRAQSII+RLR ERQLHR
Sbjct: 133 HQALTRAQSIIQRLRNERQLHR 154


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/82 (67%), Positives = 61/82 (74%)
 Frame = -1

Query: 246 ISLSSTDATNKLATSQDYVLLTLLQQRKTEEAWLMYAQCAQLPSTTCLSRLVSQLSYLNT 67
           +S  +T        S +  LLTLL+QRKTEEAWL Y QC QLPS TCLSRLVSQLSY NT
Sbjct: 65  VSFITTTTATTPHHSLNQTLLTLLRQRKTEEAWLTYVQCTQLPSPTCLSRLVSQLSYQNT 124

Query: 66  TEGLTRAQSIIERLRRERQLHR 1
            + LTRAQSII+RLR ERQLHR
Sbjct: 125 HQALTRAQSIIQRLRNERQLHR 146


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
           gi|449483612|ref|XP_004156638.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
          Length = 736

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
 Frame = -1

Query: 237 SSTDAT---NKLATSQDYVLLTLLQQRKTEEAWLMYAQCAQLPSTTCLSRLVSQLSYLNT 67
           SSTD +   +  ++S +  LL LL+QRKT+EAW+ Y QC  LPS TCLSRLVSQLSY NT
Sbjct: 52  SSTDLSLLSDSSSSSLEQRLLLLLRQRKTDEAWITYTQCNDLPSPTCLSRLVSQLSYQNT 111

Query: 66  TEGLTRAQSIIERLRRERQLHR 1
              LTRAQSI+ RLR++ QLHR
Sbjct: 112 PSSLTRAQSILTRLRQDNQLHR 133


>ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|222867485|gb|EEF04616.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/82 (59%), Positives = 61/82 (74%)
 Frame = -1

Query: 246 ISLSSTDATNKLATSQDYVLLTLLQQRKTEEAWLMYAQCAQLPSTTCLSRLVSQLSYLNT 67
           +SL+++  T+  ++S D  LL+LL+QRKTEEAW++Y Q   LP  TCLSRLVSQLSY NT
Sbjct: 60  LSLATSIPTSITSSSNDQTLLSLLRQRKTEEAWVLYTQTPHLPPPTCLSRLVSQLSYQNT 119

Query: 66  TEGLTRAQSIIERLRRERQLHR 1
              L RAQSI+ RLR E QLHR
Sbjct: 120 PLSLRRAQSILTRLRHECQLHR 141


>ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535481|gb|EEF37150.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 740

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/83 (55%), Positives = 63/83 (75%)
 Frame = -1

Query: 249 IISLSSTDATNKLATSQDYVLLTLLQQRKTEEAWLMYAQCAQLPSTTCLSRLVSQLSYLN 70
           + + ++ D +   AT+ D  LL+LL+QR+T++AW+ Y+Q   LP+ TCLSRLVSQLSY N
Sbjct: 44  LYTATTPDLSLTTATNNDQTLLSLLRQRETDKAWIFYSQSPLLPNPTCLSRLVSQLSYQN 103

Query: 69  TTEGLTRAQSIIERLRRERQLHR 1
           T   L+RAQSI+ RLR+ERQLHR
Sbjct: 104 TPLSLSRAQSILTRLRQERQLHR 126


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