BLASTX nr result

ID: Scutellaria24_contig00029352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029352
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...    91   7e-17
ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis tha...    91   7e-17
emb|CAA72072.1| G14587-6 [Arabidopsis thaliana]                        91   7e-17
emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana]            90   2e-16
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...    86   2e-15

>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1315

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/71 (66%), Positives = 59/71 (83%), Gaps = 3/71 (4%)
 Frame = -2

Query: 204  IQDAFLVLSSKEIRIQATHGSSSEATDIEEE---ATSSASKGRAITQAVRKGLIQNAIPI 34
            +QDAF +L+ KEIR+  + G+SSE  +IE+E   + ++A+KGRAITQAVRKGLIQN IPI
Sbjct: 1089 LQDAFQILACKEIRLSVSRGASSETAEIEDEGGDSNAAAAKGRAITQAVRKGLIQNTIPI 1148

Query: 33   FIELKRLLESK 1
            FIELKRLLESK
Sbjct: 1149 FIELKRLLESK 1159


>ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis thaliana]
            gi|5281022|emb|CAB45995.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268337|emb|CAB78631.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658263|gb|AEE83663.1| condensin-2 complex subunit
            D3 [Arabidopsis thaliana]
          Length = 1314

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204  IQDAFLVLSSKEIRIQATHGSSSEATDIEEEATSSAS-KGRAITQAVRKGLIQNAIPIFI 28
            +QDAF +L+ KEIR+  + G+SSE  DIEEE   +A+ KGRAIT AVRKGLIQN IPIFI
Sbjct: 1090 LQDAFQILACKEIRLSVSRGASSETADIEEEGGDAATAKGRAITHAVRKGLIQNTIPIFI 1149

Query: 27   ELKRLLESK 1
            ELKRLLESK
Sbjct: 1150 ELKRLLESK 1158


>emb|CAA72072.1| G14587-6 [Arabidopsis thaliana]
          Length = 672

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 IQDAFLVLSSKEIRIQATHGSSSEATDIEEEATSSAS-KGRAITQAVRKGLIQNAIPIFI 28
           +QDAF +L+ KEIR+  + G+SSE  DIEEE   +A+ KGRAIT AVRKGLIQN IPIFI
Sbjct: 463 LQDAFQILACKEIRLSVSRGASSETADIEEEGGDAATAKGRAITHAVRKGLIQNTIPIFI 522

Query: 27  ELKRLLESK 1
           ELKRLLESK
Sbjct: 523 ELKRLLESK 531


>emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana]
          Length = 672

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/69 (69%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 IQDAFLVLSSKEIRIQATHGSSSEATDIEEEATSSAS-KGRAITQAVRKGLIQNAIPIFI 28
           +QDAF  L+ KEIR+  + G+SSE  DIEEE   +A+ KGRAIT AVRKGLIQN IPIFI
Sbjct: 463 LQDAFQTLACKEIRLSVSRGASSETADIEEEGGDAATAKGRAITHAVRKGLIQNTIPIFI 522

Query: 27  ELKRLLESK 1
           ELKRLLESK
Sbjct: 523 ELKRLLESK 531


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 5/73 (6%)
 Frame = -2

Query: 204  IQDAFLVLSSKEIRIQATHGSSSEATDIEEE-----ATSSASKGRAITQAVRKGLIQNAI 40
            +QDAF +L+ KEIRI     S ++A +IE+E     A+++A+KGRA+TQA+RKGLIQN I
Sbjct: 1076 LQDAFQILACKEIRISPGRSSQTDAGEIEDEGGESGASAAAAKGRAVTQAIRKGLIQNTI 1135

Query: 39   PIFIELKRLLESK 1
            PIFIELKRLLESK
Sbjct: 1136 PIFIELKRLLESK 1148


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