BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029329
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   112   3e-23
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar...   112   4e-23
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...   110   9e-23

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
 Frame = -3

Query: 371 SLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVFDLMVKALSNLRQIYRALNFMNSA 192
           +LA+++A+    D  G S+F CL D+Y    SSS+VFDLMVK+ S+L  I +A+N +N A
Sbjct: 110 TLAQELALS-ASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLA 168

Query: 191 RDHGFMPSVLSYNCVLEGIIRRSARGCVDL-VKNVYYDMIDNDVSPNVFTYNIMIRGLCA 15
           +  GFMP VLSYN VL+ I+R  +RG V L  + VY +MI + VSPNV+TYNI+IRG C+
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVR--SRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCS 226

Query: 14  NKEM 3
             E+
Sbjct: 227 VGEL 230


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/125 (46%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
 Frame = -3

Query: 371 SLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVFDLMVKALSNLRQIYRALNFMNSA 192
           SLAE+V VV   D  G+ +F CL ++Y  C SSS+VFDL+VK+ + +  I +AL+ +N A
Sbjct: 100 SLAEEV-VVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLA 158

Query: 191 RDHGFMPSVLSYNCVLEGIIRRSARGCVDLVKNVYYDMIDNDVSPNVFTYNIMIRGLC-- 18
           + +GFMP VLSYN +L+ +IR   +  V + + ++ +M+++ VSPNV+TYNI+IRG C  
Sbjct: 159 KSYGFMPGVLSYNAILDAVIR--TKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216

Query: 17  ANKEM 3
            N EM
Sbjct: 217 GNLEM 221


>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/125 (46%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
 Frame = -3

Query: 371 SLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVFDLMVKALSNLRQIYRALNFMNSA 192
           SLAE+V VV   D  G+ +F CL ++Y  C SSS+VFDL+VK+ + +  I +AL+ +N A
Sbjct: 100 SLAEEV-VVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLA 158

Query: 191 RDHGFMPSVLSYNCVLEGIIRRSARGCVDLVKNVYYDMIDNDVSPNVFTYNIMIRGLC-- 18
           + +GFMP VLSYN +L+ +IR   +  V + + ++ +M+++ VSPNV+TYNI+IRG C  
Sbjct: 159 KSYGFMPGVLSYNAILDAVIR--TKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216

Query: 17  ANKEM 3
            N EM
Sbjct: 217 GNLEM 221


>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
           gi|10177971|dbj|BAB11377.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 747

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/117 (50%), Positives = 79/117 (67%)
 Frame = -3

Query: 368 LAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVFDLMVKALSNLRQIYRALNFMNSAR 189
           LAEDVA     D     VF  L +TY  C S+SSVFDL+VK+ S L  I +AL+ ++ A+
Sbjct: 102 LAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQ 161

Query: 188 DHGFMPSVLSYNCVLEGIIRRSARGCVDLVKNVYYDMIDNDVSPNVFTYNIMIRGLC 18
            HGFMP VLSYN VL+  IR  ++  +   +NV+ +M+++ VSPNVFTYNI+IRG C
Sbjct: 162 AHGFMPGVLSYNAVLDATIR--SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC 216


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
           gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 747

 Score =  110 bits (276), Expect = 9e-23
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -3

Query: 371 SLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVFDLMVKALSNLRQIYRALNFMNSA 192
           +LAEDVA     D     VF  L +TY  C S+SSVFDL+VK+ S L  I +AL+ ++ +
Sbjct: 101 TLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLS 160

Query: 191 RDHGFMPSVLSYNCVLEGIIRRSARGCVDLVKNVYYDMIDNDVSPNVFTYNIMIRGLC 18
           + HGFMP VLSYN VL+  IR  ++  +   +NV+ +M+ + VSPNVFTYNI+IRG C
Sbjct: 161 QAHGFMPGVLSYNAVLDATIR--SKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFC 216