BLASTX nr result

ID: Scutellaria24_contig00029278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029278
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   211   7e-53
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   209   1e-52
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              209   1e-52
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   206   1e-51
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   204   6e-51

>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  211 bits (536), Expect = 7e-53
 Identities = 99/115 (86%), Positives = 108/115 (93%)
 Frame = -2

Query: 345 VPQVIDTLWHLKTRDMLPAVWFIFSRKGCDASVKYLEECTLLDECEITEVELALKRFRVK 166
           VPQ+IDTLWHLK RDMLPAVWFIFSRKGCDA+V+YLE+C LLDECE +EVELALKRFR++
Sbjct: 410 VPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQ 469

Query: 165 YPDAVRESSAKALLRGVAAHHAGCLPLWKSFIEELFQKGLVKVVFATETLAAGIN 1
           YPDAVR S+ K L RGVAAHHAGCLPLWKSFIEELFQ+GLVKVVFATETLAAGIN
Sbjct: 470 YPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGIN 524


>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  209 bits (533), Expect = 1e-52
 Identities = 98/115 (85%), Positives = 110/115 (95%)
 Frame = -2

Query: 345 VPQVIDTLWHLKTRDMLPAVWFIFSRKGCDASVKYLEECTLLDECEITEVELALKRFRVK 166
           VPQV+DTLWHLK RDMLPA+WFIFSRKGCDASV+YLE+C LLDE E++EV+LALKRFR++
Sbjct: 424 VPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQ 483

Query: 165 YPDAVRESSAKALLRGVAAHHAGCLPLWKSFIEELFQKGLVKVVFATETLAAGIN 1
           YPDAVRES+ K LL+GVAAHHAGCLPLWKSFIEELFQ+GLVKVVFATETLAAGIN
Sbjct: 484 YPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGIN 538


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  209 bits (533), Expect = 1e-52
 Identities = 98/115 (85%), Positives = 110/115 (95%)
 Frame = -2

Query: 345 VPQVIDTLWHLKTRDMLPAVWFIFSRKGCDASVKYLEECTLLDECEITEVELALKRFRVK 166
           VPQV+DTLWHLK RDMLPA+WFIFSRKGCDASV+YLE+C LLDE E++EV+LALKRFR++
Sbjct: 314 VPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQ 373

Query: 165 YPDAVRESSAKALLRGVAAHHAGCLPLWKSFIEELFQKGLVKVVFATETLAAGIN 1
           YPDAVRES+ K LL+GVAAHHAGCLPLWKSFIEELFQ+GLVKVVFATETLAAGIN
Sbjct: 374 YPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGIN 428


>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
           gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
           DOB1 [Medicago truncatula]
          Length = 1201

 Score =  206 bits (525), Expect = 1e-51
 Identities = 95/115 (82%), Positives = 110/115 (95%)
 Frame = -2

Query: 345 VPQVIDTLWHLKTRDMLPAVWFIFSRKGCDASVKYLEECTLLDECEITEVELALKRFRVK 166
           VPQ+IDTLWHL++RDMLPAVWFIFSRKGCDA+V+Y+E+C LLDECE +EV LALKRFR++
Sbjct: 447 VPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVLLALKRFRIQ 506

Query: 165 YPDAVRESSAKALLRGVAAHHAGCLPLWKSFIEELFQKGLVKVVFATETLAAGIN 1
           YPDAVRE++ K LL+GVAAHHAGCLPLWK+FIEELFQ+GLVKVVFATETLAAGIN
Sbjct: 507 YPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGIN 561


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Glycine max]
          Length = 1162

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/115 (83%), Positives = 107/115 (93%)
 Frame = -2

Query: 345 VPQVIDTLWHLKTRDMLPAVWFIFSRKGCDASVKYLEECTLLDECEITEVELALKRFRVK 166
           VPQVIDTLW L++RDMLPA+WFIFSRKGCDA+V+YLE C LLDECE +EVELALKRFR +
Sbjct: 413 VPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELALKRFRKQ 472

Query: 165 YPDAVRESSAKALLRGVAAHHAGCLPLWKSFIEELFQKGLVKVVFATETLAAGIN 1
           YPDAVRES+ + LL GVAAHHAGCLPLWK+FIEELFQ+GLVKVVFATETLAAGIN
Sbjct: 473 YPDAVRESAVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGIN 527


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