BLASTX nr result

ID: Scutellaria24_contig00029244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029244
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   176   2e-42
emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]   176   2e-42
emb|CBI21817.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002300479.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
sp|P57997.1|IF2C_PHAVU RecName: Full=Translation initiation fact...   165   4e-39

>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
           chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score =  176 bits (445), Expect = 2e-42
 Identities = 96/151 (63%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
 Frame = -2

Query: 448 RRRMVDHKDGIL--DEDTELDVSIPGAATTRKGRKWSKASXXXXXXXXXXXXAPVRVEIM 275
           RRRMV   D  +  DE +EL+VSIPGAAT RKGRKWSKAS            APV+VEI+
Sbjct: 343 RRRMVAANDMEIPDDETSELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEIL 402

Query: 274 EVGEDGMLTEELAYNLAISEGEILGYLYSKGIKPDGVQKLSKEMVKMVCKQYEVEVIDAV 95
           EVGE+GMLTE+LAYNLAISEGEILG+LYSKGIKPDGVQ L K+MVKM+CK+YEVEVIDA 
Sbjct: 403 EVGEEGMLTEDLAYNLAISEGEILGFLYSKGIKPDGVQTLDKDMVKMICKEYEVEVIDAA 462

Query: 94  PVRLEEQAXXXXXXXXXXXXXXXERPPVLTI 2
            V++EE A                RPPVLTI
Sbjct: 463 GVKVEEMARKKEILDEEDLDKLENRPPVLTI 493


>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score =  176 bits (445), Expect = 2e-42
 Identities = 96/151 (63%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
 Frame = -2

Query: 448 RRRMVDHKDGIL--DEDTELDVSIPGAATTRKGRKWSKASXXXXXXXXXXXXAPVRVEIM 275
           RRRMV   D  +  DE +EL+VSIPGAAT RKGRKWSKAS            APV+VEI+
Sbjct: 333 RRRMVAANDMEIPDDETSELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEIL 392

Query: 274 EVGEDGMLTEELAYNLAISEGEILGYLYSKGIKPDGVQKLSKEMVKMVCKQYEVEVIDAV 95
           EVGE+GMLTE+LAYNLAISEGEILG+LYSKGIKPDGVQ L K+MVKM+CK+YEVEVIDA 
Sbjct: 393 EVGEEGMLTEDLAYNLAISEGEILGFLYSKGIKPDGVQTLDKDMVKMICKEYEVEVIDAA 452

Query: 94  PVRLEEQAXXXXXXXXXXXXXXXERPPVLTI 2
            V++EE A                RPPVLTI
Sbjct: 453 GVKVEEMARKKEILDEEDLDKLENRPPVLTI 483


>emb|CBI21817.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  172 bits (436), Expect = 3e-41
 Identities = 90/137 (65%), Positives = 102/137 (74%)
 Frame = -2

Query: 412 DEDTELDVSIPGAATTRKGRKWSKASXXXXXXXXXXXXAPVRVEIMEVGEDGMLTEELAY 233
           DE +EL+VSIPGAAT RKGRKWSKAS            APV+VEI+EVGE+GMLTE+LAY
Sbjct: 247 DETSELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEILEVGEEGMLTEDLAY 306

Query: 232 NLAISEGEILGYLYSKGIKPDGVQKLSKEMVKMVCKQYEVEVIDAVPVRLEEQAXXXXXX 53
           NLAISEGEILG+LYSKGIKPDGVQ L K+MVKM+CK+YEVEVIDA  V++EE A      
Sbjct: 307 NLAISEGEILGFLYSKGIKPDGVQTLDKDMVKMICKEYEVEVIDAAGVKVEEMARKKEIL 366

Query: 52  XXXXXXXXXERPPVLTI 2
                     RPPVLTI
Sbjct: 367 DEEDLDKLENRPPVLTI 383


>ref|XP_002300479.1| predicted protein [Populus trichocarpa] gi|222847737|gb|EEE85284.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  167 bits (423), Expect = 8e-40
 Identities = 94/149 (63%), Positives = 104/149 (69%)
 Frame = -2

Query: 448 RRRMVDHKDGILDEDTELDVSIPGAATTRKGRKWSKASXXXXXXXXXXXXAPVRVEIMEV 269
           RRRM+D+   I DE  EL+VSIPGAAT RKGRKW+KAS            APV+VEI+EV
Sbjct: 359 RRRMMDNDVEIPDE--ELNVSIPGAATARKGRKWTKASRKAAKIQAAREAAPVKVEILEV 416

Query: 268 GEDGMLTEELAYNLAISEGEILGYLYSKGIKPDGVQKLSKEMVKMVCKQYEVEVIDAVPV 89
           GE GM  EELAYNL + EGEILG L+SKGIKPDGVQ L KEMVKM+CK+YEVEVIDA PV
Sbjct: 417 GEKGMSIEELAYNLTMGEGEILGLLFSKGIKPDGVQTLDKEMVKMICKEYEVEVIDADPV 476

Query: 88  RLEEQAXXXXXXXXXXXXXXXERPPVLTI 2
           R EE A               ERPPVLTI
Sbjct: 477 RFEEMAKKNEILDEDDLDKLQERPPVLTI 505


>sp|P57997.1|IF2C_PHAVU RecName: Full=Translation initiation factor IF-2, chloroplastic;
           AltName: Full=PvIF2cp; Flags: Precursor
           gi|12958750|gb|AAK09431.1|AF324244_1 translation
           initiation factor 2 [Phaseolus vulgaris]
          Length = 1012

 Score =  165 bits (417), Expect = 4e-39
 Identities = 87/149 (58%), Positives = 107/149 (71%)
 Frame = -2

Query: 448 RRRMVDHKDGILDEDTELDVSIPGAATTRKGRKWSKASXXXXXXXXXXXXAPVRVEIMEV 269
           RRR++D +D ++ + +EL+VSIPGAAT RKGRKWSKAS            APV+VEI+EV
Sbjct: 348 RRRILDDED-VIQDASELNVSIPGAATARKGRKWSKASRKAARLQAARDAAPVKVEILEV 406

Query: 268 GEDGMLTEELAYNLAISEGEILGYLYSKGIKPDGVQKLSKEMVKMVCKQYEVEVIDAVPV 89
           G+ GML EELAY LA SEGEILGYLYSKGIKPDGVQ + K+MVKM+CK+Y+VEVIDA PV
Sbjct: 407 GDSGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTIDKDMVKMICKEYDVEVIDADPV 466

Query: 88  RLEEQAXXXXXXXXXXXXXXXERPPVLTI 2
           ++E                  +RPPV+TI
Sbjct: 467 KVEGLVKKREILDEDDLDKLKDRPPVITI 495


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