BLASTX nr result

ID: Scutellaria24_contig00029243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029243
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   190   9e-47
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   177   8e-43
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   167   6e-40
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   167   6e-40
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   164   9e-39

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  190 bits (483), Expect = 9e-47
 Identities = 98/119 (82%), Positives = 107/119 (89%)
 Frame = +1

Query: 61  MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGTTQERYRLLLSDSVATQHAMLATQLND 240
           MPVNLT NAI+AINGGDVNSKPLVQVLDIKLIG +QERYR LLSD+VATQ AMLATQLND
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND 60

Query: 241 RVKTGQVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDYEVIGNPKGLPDFDTVSQK 417
           RVK+GQVRKGSVIQLIDYICS VQNRKIIVVLNMETIIP+ E+IGNPK   +  + +QK
Sbjct: 61  RVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNTESHSTAQK 119


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  177 bits (449), Expect = 8e-43
 Identities = 90/112 (80%), Positives = 99/112 (88%)
 Frame = +1

Query: 61  MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGTTQERYRLLLSDSVATQHAMLATQLND 240
           MPVNLT NAIS INGGDVN KPLVQV+DIK IG+ QERYR L+SDSV+TQHAMLATQLND
Sbjct: 1   MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND 60

Query: 241 RVKTGQVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDYEVIGNPKGLPD 396
           RVK G V+KGSV+QLIDYICS VQNRKIIVVLN+ETIIP+ E+IGN K L D
Sbjct: 61  RVKHGFVKKGSVVQLIDYICSEVQNRKIIVVLNLETIIPECEIIGNAKTLTD 112


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/123 (70%), Positives = 101/123 (82%)
 Frame = +1

Query: 61  MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGTTQERYRLLLSDSVATQHAMLATQLND 240
           MPV+LT NAISAI  GDVNSKPLVQVLDIKLIG  QERY LL+SD+V+ + AMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 241 RVKTGQVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDYEVIGNPKGLPDFDTVSQKP 420
            VKTG+V+KGSVIQLIDY+CS ++NRKIIVVL +ETII D E+IGNPK     +  +QK 
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 421 TTS 429
           T S
Sbjct: 121 TPS 123


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/123 (70%), Positives = 101/123 (82%)
 Frame = +1

Query: 61  MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGTTQERYRLLLSDSVATQHAMLATQLND 240
           MPV+LT NAISAI  GDVNSKPLVQVLDIKLIG  QERY LL+SD+V+ + AMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 241 RVKTGQVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDYEVIGNPKGLPDFDTVSQKP 420
            VKTG+V+KGSVIQLIDY+CS ++NRKIIVVL +ETII D E+IGNPK     +  +QK 
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 421 TTS 429
           T S
Sbjct: 121 TPS 123


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/127 (65%), Positives = 102/127 (80%), Gaps = 4/127 (3%)
 Frame = +1

Query: 61  MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGTTQER----YRLLLSDSVATQHAMLAT 228
           MPV+LT NAI+AIN GDVN KPL+QVL+IK+IG +QER    YR L+SD V+ QHAM+A 
Sbjct: 1   MPVSLTPNAITAINDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 229 QLNDRVKTGQVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDYEVIGNPKGLPDFDTV 408
           QLNDRVK+GQV KGS++QLIDYICS V+ RK+IVVLNMETI+P  E IGNP    + DT 
Sbjct: 61  QLNDRVKSGQVEKGSIVQLIDYICSDVKGRKLIVVLNMETIVPHSETIGNPTIFGETDTE 120

Query: 409 SQKPTTS 429
           +QKP ++
Sbjct: 121 AQKPLSA 127


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