BLASTX nr result

ID: Scutellaria24_contig00029183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029183
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus...   114   1e-23
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   113   2e-23
ref|XP_002309059.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   108   4e-22
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   107   1e-21

>ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus communis]
            gi|223527968|gb|EEF30052.1| ubiquitin ligase E3 alpha,
            putative [Ricinus communis]
          Length = 2073

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/133 (40%), Positives = 86/133 (64%)
 Frame = +1

Query: 10   GDQXXXXXXXXXXKMHKKENAQSYMEADNFSVATLVSSLIKTFVELEPGCMTKLQKLAPH 189
            G+Q          +MHK++N  ++ E+D  ++++L+ SL+K F EL+ GC TKLQ+LAP 
Sbjct: 1062 GEQSLLSLLVSLMRMHKRDNLDNFSESDGCNISSLIESLLKKFAELDSGCRTKLQQLAPE 1121

Query: 190  LANQFSHSTSNDNSRDMDLSDESEKRKAKSRERQAAILEKMRAQQSKFLESFNSSKDDEM 369
            +    S  + + ++  +  + +SEKRKAK+RERQAAIL KM+A+QSKFL S NS+ +D++
Sbjct: 1122 VVIHLSQPSPHSDAHSVGSASDSEKRKAKARERQAAILAKMKAEQSKFLSSINSTNEDDL 1181

Query: 370  DDAKSEPDVCDSE 408
                 E +  D +
Sbjct: 1182 RAGLEESNTDDEQ 1194


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  113 bits (282), Expect = 2e-23
 Identities = 62/138 (44%), Positives = 86/138 (62%), Gaps = 5/138 (3%)
 Frame = +1

Query: 10   GDQXXXXXXXXXXKMHKKENAQSYMEADNFSVATLVSSLIKTFVELEPGCMTKLQKLAPH 189
            G+Q          +MH+KEN  +++EA   S+ +L+ SL+K F E++  CMTKLQKLAP 
Sbjct: 1035 GEQSLLSLLVLLMEMHRKENVDNFVEAGGCSLYSLIESLLKKFAEIDNRCMTKLQKLAPE 1094

Query: 190  LANQFSHSTSNDNSRDMDLSDESEKRKAKSRERQAAILEKMRAQQSKFLESFNSSKDD-- 363
            + +  S      +S     + +SEKRKAK+RERQAAI+EKMRAQQSKFL S +S+ DD  
Sbjct: 1095 VVSHISECVPTRDSSVSSSASDSEKRKAKARERQAAIMEKMRAQQSKFLASIDSTVDDGS 1154

Query: 364  ---EMDDAKSEPDVCDSE 408
                  D  +E DV +S+
Sbjct: 1155 QLGHEGDLDTEQDVEESD 1172


>ref|XP_002309059.1| predicted protein [Populus trichocarpa] gi|222855035|gb|EEE92582.1|
            predicted protein [Populus trichocarpa]
          Length = 1774

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/105 (49%), Positives = 77/105 (73%)
 Frame = +1

Query: 49   KMHKKENAQSYMEADNFSVATLVSSLIKTFVELEPGCMTKLQKLAPHLANQFSHSTSNDN 228
            ++HK+E++ + +EA +++ ++L+ SL+K F E++ GCMTKLQ+LAP +A   S S  N  
Sbjct: 1046 RIHKRESSDNLLEAGSYNFSSLIESLLKRFAEIDAGCMTKLQQLAPEMAIHLSQSVPNIE 1105

Query: 229  SRDMDLSDESEKRKAKSRERQAAILEKMRAQQSKFLESFNSSKDD 363
               +  + +SEKRKAK+ ERQAAIL KM+A+QSKFL S NS+ DD
Sbjct: 1106 KNTLGSASDSEKRKAKALERQAAILAKMKAEQSKFLLSMNSATDD 1150


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/118 (47%), Positives = 76/118 (64%)
 Frame = +1

Query: 10   GDQXXXXXXXXXXKMHKKENAQSYMEADNFSVATLVSSLIKTFVELEPGCMTKLQKLAPH 189
            G+Q          +MH+KEN  +++EA   S+ TL+ SL+K F E++  CMT LQKLAP 
Sbjct: 1035 GEQSLLSLLVLLMEMHRKENVDNFVEAGGCSLYTLIESLLKKFAEIDNRCMTMLQKLAPE 1094

Query: 190  LANQFSHSTSNDNSRDMDLSDESEKRKAKSRERQAAILEKMRAQQSKFLESFNSSKDD 363
            + +  S      +S     + +SEKRKAK+RERQAAI+EKMR QQSKFL S +S+ DD
Sbjct: 1095 VVSYISEYVPTRDSSVSSSASDSEKRKAKARERQAAIMEKMRTQQSKFLASIDSTVDD 1152


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/117 (44%), Positives = 78/117 (66%)
 Frame = +1

Query: 55   HKKENAQSYMEADNFSVATLVSSLIKTFVELEPGCMTKLQKLAPHLANQFSHSTSNDNSR 234
            HK+EN  +++EA N ++++ + SL+K F E++  CM KLQKLAP + N    S  N ++ 
Sbjct: 1068 HKRENPDNFIEAINCNLSSWIESLLKKFAEMDSNCMAKLQKLAPEVVNHLLQSNPNGDTN 1127

Query: 235  DMDLSDESEKRKAKSRERQAAILEKMRAQQSKFLESFNSSKDDEMDDAKSEPDVCDS 405
             +  + + EKRKAK+RERQAAI+ KMRA+QSKFL+S  S  ++     +S+  V DS
Sbjct: 1128 ALGSASDGEKRKAKARERQAAIMAKMRAEQSKFLKSLGSDMENGSSKLQSKQGVSDS 1184


Top