BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029177
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   203   2e-50
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   181   1e-43
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...   174   8e-42

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  203 bits (517), Expect = 2e-50
 Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 21/218 (9%)
 Frame = +3

Query: 24  MESIVLPCKT----ILPSK-----------FQEKPQTAKLYTRFTP---PKPTNDDYLKR 149
           ME+++LPCK+      PSK            Q +    K++   TP   PK T D +L  
Sbjct: 1   MENLILPCKSRPPLATPSKQGTSFECSSRIIQPRVSFTKIHQPLTPKLKPKVT-DAHLNH 59

Query: 150 LCKLGRLSEAISALDSCA---STVRPSTLSYLIESCIYSSSLDLCYKIHARITKLIKQPD 320
           LCK GRL++AI+ LD+ A   S V+P+T   L++SCI   S +L  K+HARI  L+++ +
Sbjct: 60  LCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARIG-LLEEMN 118

Query: 321 PFIETKLVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMD 500
           PF+ETKLV M+AKCGSL +A  VF EMR+R+LYAWSA+IGA SRE+MW +VV+ F++MM+
Sbjct: 119 PFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMME 178

Query: 501 DGGVIPDSFLLPKILQACANLGDVETGKMIHGIVIKCG 614
           D G++PD FLLPKILQAC N GD ETGK+IH +VI+CG
Sbjct: 179 D-GIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCG 215


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  181 bits (459), Expect = 9e-44
 Identities = 98/212 (46%), Positives = 136/212 (64%), Gaps = 15/212 (7%)
 Frame = +3

Query: 24  MESIVLPCKTI------------LPSKFQEKPQTAKLYTRFTPPKPTNDDYLKRLCKLGR 167
           ME + +PC+T              P KF  KP    ++  +      NDD+L  LC  G 
Sbjct: 1   MEKLAIPCQTNPPISGPASVIKPRPLKFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGL 60

Query: 168 LSEAISALDSCA---STVRPSTLSYLIESCIYSSSLDLCYKIHARITKLIKQPDPFIETK 338
           L EAI+A+DS +   S +  +T   L+++CI   S++L  ++H R+  L+ + +PF+ETK
Sbjct: 61  LREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMG-LVHRVNPFVETK 119

Query: 339 LVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMDDGGVIP 518
           LV M+AKCG L DA  VFD M++R+LY WSA+IGA SRE+ W +VVELF+ MM D GV+P
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGD-GVLP 178

Query: 519 DSFLLPKILQACANLGDVETGKMIHGIVIKCG 614
           D+FL PKILQAC N  D+ET K+IH +VI+CG
Sbjct: 179 DAFLFPKILQACGNCEDLETVKLIHSLVIRCG 210



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
 Frame = +3

Query: 165 RLSEAISALDSCA-STVRPSTLSYL--IESCIYSSSLDLCYKIHARITKLIKQPDPFIET 335
           R+S+A+        + V P+T++      +C    SL    +IH    K+    +  +  
Sbjct: 331 RISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGN 390

Query: 336 KLVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMDDGGVI 515
            L+ M++KCG L+ A  VFD + ++D+Y W+++IG   +    G   ELF   + +  V+
Sbjct: 391 SLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELF-MRLRESTVM 449

Query: 516 PDSFLLPKILQACANLGDVETGKMIHGIVIKCG 614
           P+      ++  C   GD +    +  I+ K G
Sbjct: 450 PNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDG 482


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  181 bits (459), Expect = 9e-44
 Identities = 98/212 (46%), Positives = 136/212 (64%), Gaps = 15/212 (7%)
 Frame = +3

Query: 24  MESIVLPCKTI------------LPSKFQEKPQTAKLYTRFTPPKPTNDDYLKRLCKLGR 167
           ME + +PC+T              P KF  KP    ++  +      NDD+L  LC  G 
Sbjct: 1   MEKLAIPCQTNPPISGPASVIKPRPLKFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGL 60

Query: 168 LSEAISALDSCA---STVRPSTLSYLIESCIYSSSLDLCYKIHARITKLIKQPDPFIETK 338
           L EAI+A+DS +   S +  +T   L+++CI   S++L  ++H R+  L+ + +PF+ETK
Sbjct: 61  LREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMG-LVHRVNPFVETK 119

Query: 339 LVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMDDGGVIP 518
           LV M+AKCG L DA  VFD M++R+LY WSA+IGA SRE+ W +VVELF+ MM D GV+P
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGD-GVLP 178

Query: 519 DSFLLPKILQACANLGDVETGKMIHGIVIKCG 614
           D+FL PKILQAC N  D+ET K+IH +VI+CG
Sbjct: 179 DAFLFPKILQACGNCEDLETVKLIHSLVIRCG 210



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
 Frame = +3

Query: 165 RLSEAISALDSCA-STVRPSTLSYL--IESCIYSSSLDLCYKIHARITKLIKQPDPFIET 335
           R+S+A+        + V P+T++      +C    SL    +IH    K+    +  +  
Sbjct: 331 RISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGN 390

Query: 336 KLVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMDDGGVI 515
            L+ M++KCG L+ A  VFD + ++D+Y W+++IG   +    G   ELF   + +  V+
Sbjct: 391 SLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELF-MRLRESTVM 449

Query: 516 PDSFLLPKILQACANLGDVETGKMIHGIVIKCG 614
           P+      ++  C   GD +    +  I+ K G
Sbjct: 450 PNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDG 482


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  181 bits (458), Expect = 1e-43
 Identities = 97/206 (47%), Positives = 136/206 (66%), Gaps = 9/206 (4%)
 Frame = +3

Query: 24  MESIVLPCKTILPSKFQEKPQTAKLY----TRFTPP--KPTNDDYLKRLCKLGRLSEAIS 185
           ME++++P     P     +  T   +    T+ + P  K   D +L  LCK GRL+EA+S
Sbjct: 1   MENLIMPIIKKSPISIPNEQDTLSAFSTKPTKSSVPFTKKITDSHLNYLCKKGRLNEAVS 60

Query: 186 ALDSCA---STVRPSTLSYLIESCIYSSSLDLCYKIHARITKLIKQPDPFIETKLVGMFA 356
           AL+  A   S V P T   L++SCI  +S+ L  K+HA    L+++ +PF+ETKLV M+A
Sbjct: 61  ALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAHF-HLVQEKNPFLETKLVSMYA 119

Query: 357 KCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMDDGGVIPDSFLLP 536
           KCGSL DA  +F EMR+++LY WSA+IGA SRE  W +VVELFY MM++   +PD+FLLP
Sbjct: 120 KCGSLSDARKLFGEMREKNLYTWSAMIGAFSREHRWKEVVELFYMMMEE-NCLPDAFLLP 178

Query: 537 KILQACANLGDVETGKMIHGIVIKCG 614
           KILQAC N  D+++G+M+H + IKCG
Sbjct: 179 KILQACGNSRDIKSGEMVHSLAIKCG 204



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
 Frame = +3

Query: 111 TPPKPTNDDYLKRLCKLGRLSEAISAL-DSCASTVRPS--TLSYLIESCIYSSSLDLCYK 281
           +P   T    +  L +  + S+A+    D   + V P+  T+S  + +C     L+   +
Sbjct: 307 SPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSACASLKVLNEGLE 366

Query: 282 IHARITKLIKQPDPFIETKLVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKM 461
           IHA   KL    D  +   L+ M++KCG L++A+ VFD M ++D+Y W+++IG   +   
Sbjct: 367 IHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGY 426

Query: 462 WGDVVELFYWM 494
            G    LF  M
Sbjct: 427 CGKAHMLFMKM 437


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
           ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score =  174 bits (442), Expect = 8e-42
 Identities = 107/213 (50%), Positives = 133/213 (62%), Gaps = 16/213 (7%)
 Frame = +3

Query: 24  MESIVLPC--KTIL----PSKFQEKPQ----TAKLYTRFTPPKPTN---DDYLKRLCKLG 164
           ME + +P   KT L    P+K +  P+    + K    FT  K  N   D+ L  LC+ G
Sbjct: 1   MEKLFVPSFPKTFLNYQTPAKVENSPEVHPKSRKKNLSFTKKKEPNIIPDEQLDYLCRNG 60

Query: 165 RLSEAISALDSC---ASTVRPSTLSYLIESCIYSSSLDLCYKIHARITKLIKQPDPFIET 335
            L EA  ALDS     S V+ ST   L+ESCI S S+ L   +HAR   L  +PD F+ET
Sbjct: 61  SLLEAEKALDSLFQQGSKVKRSTYLNLLESCIDSGSIHLGRILHARFG-LFPEPDVFVET 119

Query: 336 KLVGMFAKCGSLDDAFAVFDEMRQRDLYAWSAIIGACSREKMWGDVVELFYWMMDDGGVI 515
           KL+ M+AKCG L DA  VFD MR+R+LY WSA+IGA SRE  W +V +LF  MM++ GV+
Sbjct: 120 KLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRWREVSKLFRLMMEE-GVL 178

Query: 516 PDSFLLPKILQACANLGDVETGKMIHGIVIKCG 614
           PD FL PKILQ CAN GDVETGK+IH +VIK G
Sbjct: 179 PDDFLFPKILQGCANCGDVETGKLIHSVVIKLG 211



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/93 (31%), Positives = 50/93 (53%)
 Frame = +3

Query: 222 TLSYLIESCIYSSSLDLCYKIHARITKLIKQPDPFIETKLVGMFAKCGSLDDAFAVFDEM 401
           T+   + +C Y   ++L  ++H+   K+    D  +   LV M++KCG L+DA  VFD +
Sbjct: 354 TIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413

Query: 402 RQRDLYAWSAIIGACSREKMWGDVVELFYWMMD 500
           + +D+Y W+++I    +    G   ELF  M D
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD 446