BLASTX nr result

ID: Scutellaria24_contig00029152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029152
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32576.3| unnamed protein product [Vitis vinifera]              226   1e-57
ref|XP_003631607.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   226   1e-57
emb|CAN61314.1| hypothetical protein VITISV_013389 [Vitis vinifera]   226   1e-57
ref|XP_002313800.1| chromatin remodeling complex subunit [Populu...   221   4e-56
ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago tr...   212   3e-53

>emb|CBI32576.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  226 bits (576), Expect = 1e-57
 Identities = 102/142 (71%), Positives = 123/142 (86%)
 Frame = -2

Query: 426 DESGEINSSVEKLFKFETVQSWTPTVPRMSMATPAMSSGLLPEAVITDELVKSEGPSVEY 247
           D + +++SSVEKL++F+ VQS  P VP+ +M+ P M+SGL PE+   +ELV+SEGPSVEY
Sbjct: 232 DTAKQLDSSVEKLYRFDMVQSCPPVVPKANMSAPTMASGLFPESAFVEELVRSEGPSVEY 291

Query: 246 HCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSNMSPSDFILMEPPEAGGASGGKWT 67
           HCNSCSADCSRKRYHCQKQADFDLC EC+NN KFGS+MS SDFILMEP EA G SGGKWT
Sbjct: 292 HCNSCSADCSRKRYHCQKQADFDLCTECFNNQKFGSDMSSSDFILMEPAEAPGVSGGKWT 351

Query: 66  DQETLLLLEAIELFRDNWSEIA 1
           DQETLLLLEA+EL+++NW+EIA
Sbjct: 352 DQETLLLLEALELYKENWNEIA 373


>ref|XP_003631607.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Vitis vinifera]
          Length = 1012

 Score =  226 bits (576), Expect = 1e-57
 Identities = 102/142 (71%), Positives = 123/142 (86%)
 Frame = -2

Query: 426 DESGEINSSVEKLFKFETVQSWTPTVPRMSMATPAMSSGLLPEAVITDELVKSEGPSVEY 247
           D + +++SSVEKL++F+ VQS  P VP+ +M+ P M+SGL PE+   +ELV+SEGPSVEY
Sbjct: 261 DTAKQLDSSVEKLYRFDMVQSCPPVVPKANMSAPTMASGLFPESAFVEELVRSEGPSVEY 320

Query: 246 HCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSNMSPSDFILMEPPEAGGASGGKWT 67
           HCNSCSADCSRKRYHCQKQADFDLC EC+NN KFGS+MS SDFILMEP EA G SGGKWT
Sbjct: 321 HCNSCSADCSRKRYHCQKQADFDLCTECFNNQKFGSDMSSSDFILMEPAEAPGVSGGKWT 380

Query: 66  DQETLLLLEAIELFRDNWSEIA 1
           DQETLLLLEA+EL+++NW+EIA
Sbjct: 381 DQETLLLLEALELYKENWNEIA 402


>emb|CAN61314.1| hypothetical protein VITISV_013389 [Vitis vinifera]
          Length = 844

 Score =  226 bits (576), Expect = 1e-57
 Identities = 102/142 (71%), Positives = 123/142 (86%)
 Frame = -2

Query: 426 DESGEINSSVEKLFKFETVQSWTPTVPRMSMATPAMSSGLLPEAVITDELVKSEGPSVEY 247
           D + +++SSVEKL++F+ VQS  P VP+ +M+ P M+SGL PE+   +ELV+SEGPSVEY
Sbjct: 83  DTAKQLDSSVEKLYRFDMVQSCPPVVPKANMSAPTMASGLFPESAFVEELVRSEGPSVEY 142

Query: 246 HCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSNMSPSDFILMEPPEAGGASGGKWT 67
           HCNSCSADCSRKRYHCQKQADFDLC EC+NN KFGS+MS SDFILMEP EA G SGGKWT
Sbjct: 143 HCNSCSADCSRKRYHCQKQADFDLCTECFNNQKFGSDMSSSDFILMEPAEAPGVSGGKWT 202

Query: 66  DQETLLLLEAIELFRDNWSEIA 1
           DQETLLLLEA+EL+++NW+EIA
Sbjct: 203 DQETLLLLEALELYKENWNEIA 224


>ref|XP_002313800.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222850208|gb|EEE87755.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1010

 Score =  221 bits (564), Expect = 4e-56
 Identities = 102/142 (71%), Positives = 120/142 (84%)
 Frame = -2

Query: 426 DESGEINSSVEKLFKFETVQSWTPTVPRMSMATPAMSSGLLPEAVITDELVKSEGPSVEY 247
           DE+ + +SS+EKLF FE +Q     VP+ ++A P  SS L PE+ I +EL K EGPSVEY
Sbjct: 233 DEAAKKDSSLEKLFCFEAIQPCPSIVPKPNLAAPTTSSRLFPESAIAEELAKLEGPSVEY 292

Query: 246 HCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSNMSPSDFILMEPPEAGGASGGKWT 67
           HCNSCSADCSRKRYHCQKQAD+DLCA+C+NNGKFGSNMS SDFILMEP EA GASGGKWT
Sbjct: 293 HCNSCSADCSRKRYHCQKQADYDLCADCFNNGKFGSNMSSSDFILMEPAEAAGASGGKWT 352

Query: 66  DQETLLLLEAIELFRDNWSEIA 1
           DQETLLLLEA+EL+++NW+EIA
Sbjct: 353 DQETLLLLEALELYKENWNEIA 374


>ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago truncatula]
           gi|355507940|gb|AES89082.1| SWI/SNF complex subunit
           SMARCC1 [Medicago truncatula]
          Length = 1041

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/145 (68%), Positives = 115/145 (79%), Gaps = 3/145 (2%)
 Frame = -2

Query: 426 DESGEINSSVEKLFKFETVQSWTPTVPRMSMATPAMSSGLLPEAVITDELVKSEGPSVE- 250
           D   E NS +EKL+ FET+QS  P V +  + TPAM+SGL PE  I +ELVK EGP+VE 
Sbjct: 243 DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEM 302

Query: 249 --YHCNSCSADCSRKRYHCQKQADFDLCAECYNNGKFGSNMSPSDFILMEPPEAGGASGG 76
             YHCNSCS DCSRKRYHCQKQADFDLC +C+NN KFG+ MSP DFILMEP EA G S G
Sbjct: 303 LEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSG 362

Query: 75  KWTDQETLLLLEAIELFRDNWSEIA 1
           KWTDQETLLLLEA+EL+++NW+EIA
Sbjct: 363 KWTDQETLLLLEALELYKENWTEIA 387


Top