BLASTX nr result

ID: Scutellaria24_contig00029142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029142
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...    65   4e-09
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_002328803.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    58   7e-07
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-07

>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/61 (44%), Positives = 42/61 (68%)
 Frame = -2

Query: 399  VDHASKFFDELRVQGFEANRWTYDTMVHGLAKHGQSAEARKLLGEMLSRGFDLSNVTRNI 220
            +DHA + FD +  +G+E N WTYD +VHGL K+G+  EAR+ + EM  +GF  S  T+++
Sbjct: 835  IDHARELFDRICQKGYEPNHWTYDILVHGLFKNGRIGEARRWVDEMFRKGFSPSGRTKSL 894

Query: 219  L 217
            +
Sbjct: 895  M 895


>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/64 (40%), Positives = 44/64 (68%)
 Frame = -2

Query: 408  KDGVDHASKFFDELRVQGFEANRWTYDTMVHGLAKHGQSAEARKLLGEMLSRGFDLSNVT 229
            +  +D A + F+ +  +G+E NRWTYD +VHGL KHG+++EA K + EM  +GF+ +  T
Sbjct: 818  RSDMDLALELFNRICQKGYEPNRWTYDILVHGLFKHGRTSEANKWVEEMFCKGFEPTEAT 877

Query: 228  RNIL 217
            + ++
Sbjct: 878  KLLI 881


>ref|XP_002328803.1| predicted protein [Populus trichocarpa] gi|222839101|gb|EEE77452.1|
           predicted protein [Populus trichocarpa]
          Length = 881

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -2

Query: 399 VDHASKFFDELRVQGFEANRWTYDTMVHGLAKHGQSAEARKLLGEMLSRGFD 244
           +D A K+F+ LR +GFE NRWT+D M HG  KHG+  + R  + EM  +GFD
Sbjct: 828 LDRAQKYFNRLRDKGFEPNRWTFDIMAHGHFKHGRQVQGRLWVDEMSRKGFD 879


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = -2

Query: 399  VDHASKFFDELRVQGFEANRWTYDTMVHGLAKHGQSAEARKLLGEMLSRGFDLSNVTRNI 220
            ++ A + FD L  +G+  N+WTYD +VHGL K G++ EA++LL  M  +GF L+  T+ +
Sbjct: 820  MERAFELFDRLCEKGYVPNKWTYDILVHGLFKQGRTVEAKRLLEIMHKKGFSLTECTQAL 879

Query: 219  L 217
            +
Sbjct: 880  I 880


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Cucumis sativus]
          Length = 913

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = -2

Query: 399  VDHASKFFDELRVQGFEANRWTYDTMVHGLAKHGQSAEARKLLGEMLSRGFDLSNVTRNI 220
            ++ A + FD L  +G+  N+WTYD +VHGL K G++ EA++LL  M  +GF L+  T+ +
Sbjct: 844  MERAFELFDRLCEKGYVPNKWTYDILVHGLFKQGRTVEAKRLLEIMHKKGFSLTECTQAL 903

Query: 219  L 217
            +
Sbjct: 904  I 904


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