BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029132
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   133   1e-29
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   132   3e-29
emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicoti...   132   3e-29
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   130   8e-29
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              130   1e-28

>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   KLRAVRQLVNKQIEFQPWGQDARAKVGSRLIELILQTAYIQPPANQSAEGAPDIRPAFVH 182
           KLRAV Q+V +Q + +PWGQDARAKVGSRLI+L+LQTAYIQPPANQ A   PDIRPAFVH
Sbjct: 349 KLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVH 408

Query: 183 TSRT-TKEIKGPSRRYGVIQCDPIIRKGLERTA 278
           + RT  KE K  SRRYG+IQCD ++ KGLERTA
Sbjct: 409 SVRTVAKETKSASRRYGIIQCDELVFKGLERTA 441


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/93 (70%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   KLRAVRQLVNKQIEFQPWGQDARAKVGSRLIELILQTAYIQPPANQSAEGAPDIRPAFVH 182
           KLRAV Q+V +Q + +PWGQDA+AKVGSRLIEL+LQTAYIQPPANQ A   PDIRPAF+H
Sbjct: 350 KLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLH 409

Query: 183 TSRT-TKEIKGPSRRYGVIQCDPIIRKGLERTA 278
           + RT  KE K  SRRYG+IQCD ++ KGLERTA
Sbjct: 410 SVRTVAKETKSASRRYGIIQCDELVFKGLERTA 442


>emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicotiana tabacum]
          Length = 562

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/93 (70%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   KLRAVRQLVNKQIEFQPWGQDARAKVGSRLIELILQTAYIQPPANQSAEGAPDIRPAFVH 182
           KLRAV Q+V +Q + +PWGQDA+AKVGSRLIEL+LQTAYIQPPANQ A   PDIRPAF+H
Sbjct: 46  KLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLH 105

Query: 183 TSRT-TKEIKGPSRRYGVIQCDPIIRKGLERTA 278
           + RT  KE K  SRRYG+IQCD ++ KGLERTA
Sbjct: 106 SVRTVAKETKSASRRYGIIQCDELVFKGLERTA 138


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  130 bits (328), Expect = 8e-29
 Identities = 66/93 (70%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   KLRAVRQLVNKQIEFQPWGQDARAKVGSRLIELILQTAYIQPPANQSAEGAPDIRPAFVH 182
           KLRAV Q+V +Q + +PWGQDARAKVGSRLI+L+LQTAYIQPPANQ A   PDI PAFVH
Sbjct: 349 KLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVH 408

Query: 183 TSRT-TKEIKGPSRRYGVIQCDPIIRKGLERTA 278
           + RT  KE K  SRRYG+IQCD ++ KGLERTA
Sbjct: 409 SVRTVAKETKSASRRYGIIQCDELVFKGLERTA 441


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/93 (65%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   KLRAVRQLVNKQIEFQPWGQDARAKVGSRLIELILQTAYIQPPANQSAEGAPDIRPAFVH 182
           KL+ VRQ+V +Q + +PWGQDA  KVGSRLIEL+++TAYIQPPA+Q  +G PDIRPAFVH
Sbjct: 139 KLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVH 198

Query: 183 TSRTT-KEIKGPSRRYGVIQCDPIIRKGLERTA 278
           T +T  KE +  +RRYGVI+CDP++RKGLE+TA
Sbjct: 199 TLKTVIKETQKGTRRYGVIECDPLVRKGLEKTA 231