BLASTX nr result

ID: Scutellaria24_contig00029108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029108
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
emb|CBI17696.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   103   2e-20
ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus ...    91   1e-16
ref|NP_189369.1| C3H4 type zinc finger protein [Arabidopsis thal...    85   7e-15

>ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/152 (44%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
 Frame = +1

Query: 94  LSWAVAFFSLIILFF----IHGFTSSPVRLLFSAGS-FQPVVVSKRNIPAMEAISVEGSG 258
           +SW   F+  + L F      GFT S  R  F  G  F P +VS    PAMEA+S + S 
Sbjct: 10  VSWNRFFWCTLFLVFSCVLFSGFTFSTFRFFFFFGEKFHPEIVSTWRTPAMEALSGDSSA 69

Query: 259 APATAMIRETVSFPDEVLIFLKYPPSASLFTKDDVSCMYLHRGSS------ELSPASLGF 420
            PA + IRETV  PD+VL+FLKYPPS+ LFTK+D+ C+YL    S       L P  +  
Sbjct: 70  VPAPS-IRETVILPDQVLVFLKYPPSSRLFTKEDLLCVYLSANKSSSQSQRRLPPNHIDG 128

Query: 421 DGEGPQIVRCPPPPRGAVLSLAVKHNGNLVPG 516
                QIVRCP  PRG  +SLA+K  G + PG
Sbjct: 129 KDVDDQIVRCPLIPRGYTVSLALKSGGYIHPG 160


>emb|CBI17696.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  103 bits (256), Expect = 2e-20
 Identities = 64/139 (46%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
 Frame = +1

Query: 112 FFSLIILFFIHGFTSSPVRLLFSAGSFQPVVVSKRNIPAMEAISVEGSGAPATAMIRETV 291
           FF +     + G T S   +      F+PV+VS     AMEAI+ E    PA + IRETV
Sbjct: 53  FFVVFSCVVVTGVTFSTFSIF--GEKFRPVLVSSWRKQAMEAIAGESFIPPAIS-IRETV 109

Query: 292 SFPDEVLIFLKYPPSASLFTKDDVSCMYLHRGSSE----LSPASLGFDGEGPQIVRCPPP 459
            FPD+ L+FLKYPPSA LFTKDD+ C+Y    SS+    L P  +  +    QIVRCP  
Sbjct: 110 IFPDQELVFLKYPPSARLFTKDDLDCLYFSPNSSDSHIKLPPEDVDGETRDHQIVRCPRR 169

Query: 460 PRGAVLSLAVKHNGNLVPG 516
           PRG  LSL +K N  L PG
Sbjct: 170 PRGFTLSLVLKSNALLRPG 188


>ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 908

 Score =  103 bits (256), Expect = 2e-20
 Identities = 64/139 (46%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
 Frame = +1

Query: 112 FFSLIILFFIHGFTSSPVRLLFSAGSFQPVVVSKRNIPAMEAISVEGSGAPATAMIRETV 291
           FF +     + G T S   +      F+PV+VS     AMEAI+ E    PA + IRETV
Sbjct: 20  FFVVFSCVVVTGVTFSTFSIF--GEKFRPVLVSSWRKQAMEAIAGESFIPPAIS-IRETV 76

Query: 292 SFPDEVLIFLKYPPSASLFTKDDVSCMYLHRGSSE----LSPASLGFDGEGPQIVRCPPP 459
            FPD+ L+FLKYPPSA LFTKDD+ C+Y    SS+    L P  +  +    QIVRCP  
Sbjct: 77  IFPDQELVFLKYPPSARLFTKDDLDCLYFSPNSSDSHIKLPPEDVDGETRDHQIVRCPRR 136

Query: 460 PRGAVLSLAVKHNGNLVPG 516
           PRG  LSL +K N  L PG
Sbjct: 137 PRGFTLSLVLKSNALLRPG 155


>ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|325530316|sp|B9SLR1.1|Y231_RICCO RecName:
           Full=UPF0392 protein RCOM_0530710
           gi|223533682|gb|EEF35417.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 552

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
 Frame = +1

Query: 94  LSWAVAFF-SLIILFFIHGFTSSPVRLLFSAGSFQPVVVSKRNIPAMEA---ISVEGSGA 261
           +SW   F+ +L+++     FT+S  R       FQP +VS    PAMEA   I    S A
Sbjct: 10  VSWNRFFWCTLLLVLSCVLFTASTFR-----EKFQPEIVSAWRQPAMEATTTIMSTNSPA 64

Query: 262 PATAMIRETVSFPDEVLIFLKYPPSASLFTKDDVSCMYLHRGSSELSPASL-----GFDG 426
             +  IRETV  PD+VLIF+ YP S+ LFTK+D SC+Y  R S+ LS   L       DG
Sbjct: 65  KPSISIRETVMLPDQVLIFVNYPQSSRLFTKEDFSCVYFSRNSTSLSETQLKKPPNQIDG 124

Query: 427 E--GPQIVRCPPPPRGAVLSLAVKHNGNLV-PG 516
                QIVRCP  PRG  +SL +K  G  + PG
Sbjct: 125 TDVNNQIVRCPLNPRGFSVSLELKSGGGYINPG 157


>ref|NP_189369.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
           gi|332643780|gb|AEE77301.1| C3H4 type zinc finger
           protein [Arabidopsis thaliana]
          Length = 913

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
 Frame = +1

Query: 94  LSWAVAFFSLIILFFIHGFTSSPVRLLFSAGSFQPVV---VSKRNIPAMEAISVEGSGAP 264
           +SW   F+ +I+  F+  F       +F  G F+PVV   +S        A+  E   + 
Sbjct: 17  VSWRTFFWFVIL--FVFSFVLFSTMFIFK-GKFRPVVRSTISFSTAVTARAVFRESISSS 73

Query: 265 ATAMIRETVSFPDEVLIFLKYPPSASLFTKDDVSCMYLHRGSSELS---PASLGFDGEGP 435
               IRE V  P++ L+FLKYP S  LFTKDD+ C++   GSS+L    P ++  D  G 
Sbjct: 74  PAVTIREAVKLPEQTLVFLKYPQSRRLFTKDDLICVF--SGSSKLRKVYPTAVDRDKFGG 131

Query: 436 QIVRCPPPPRGAVLSLAV 489
           QIVRCP  PRG  +SLAV
Sbjct: 132 QIVRCPETPRGYTISLAV 149


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