BLASTX nr result

ID: Scutellaria24_contig00029099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00029099
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    82   4e-14
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    82   5e-14
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    82   5e-14
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    79   4e-13
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    79   5e-13

>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = +3

Query: 6    NPVFHERTKHLDIDCHIVRNHYKSGFLDLHHIASKLQLADLFTKSLGTSQFISLLSKLGM 185
            NPVFHERTKH++ DCH VR+  + G +  HH+ +  QLAD+FTK+LG SQF+ L+SKLG+
Sbjct: 1061 NPVFHERTKHIESDCHSVRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYLMSKLGI 1120

Query: 186  VKL 194
              L
Sbjct: 1121 QDL 1123


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = +3

Query: 6    NPVFHERTKHLDIDCHIVRNHYKSGFLDLHHIASKLQLADLFTKSLGTSQFISLLSKLGM 185
            NPVFHERTKH++ DCH VR+  + G +  HH+ +  QLAD+FTK+LG +QFI L+SKLG+
Sbjct: 1425 NPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGI 1484

Query: 186  VKL 194
              L
Sbjct: 1485 QNL 1487


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = +3

Query: 6    NPVFHERTKHLDIDCHIVRNHYKSGFLDLHHIASKLQLADLFTKSLGTSQFISLLSKLGM 185
            NPVFHERTKH++ DCH VR+  + G +  HH+ +  QLAD+FTK+LG +QFI L+SKLG+
Sbjct: 1347 NPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGI 1406

Query: 186  VKL 194
              L
Sbjct: 1407 QNL 1409


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/63 (57%), Positives = 47/63 (74%)
 Frame = +3

Query: 6    NPVFHERTKHLDIDCHIVRNHYKSGFLDLHHIASKLQLADLFTKSLGTSQFISLLSKLGM 185
            NPV+HERTKH++IDCH+VR   +SG +   H+ S  QLADLFTK L +S F SLLSK G+
Sbjct: 1395 NPVYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLADLFTKPLNSSIFHSLLSKFGV 1454

Query: 186  VKL 194
            + +
Sbjct: 1455 LDI 1457


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/60 (60%), Positives = 46/60 (76%)
 Frame = +3

Query: 6    NPVFHERTKHLDIDCHIVRNHYKSGFLDLHHIASKLQLADLFTKSLGTSQFISLLSKLGM 185
            NPVFHERTKH++IDCH VR   +SG +   ++ SKLQ AD+FTK+LG  QF+ L SKLG+
Sbjct: 1250 NPVFHERTKHIEIDCHFVREKVQSGEIVTTYLPSKLQXADMFTKALGRQQFLFLSSKLGI 1309


Top